| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3614 |
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| Symbol | |
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| ID | 5714144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 19302 |
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| End bp | 19775 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641276532 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001541828 |
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| Protein GI | 159046156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.463393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAACTT GCCTCTTCGT CGGTCTGCTT GCTGCGCTGA TCGCCTTTCT TGTCGATCAG
GCAACGAAGG CAATCGTTGT GTCCAATGCG ACTGTTCTTA GTTCCGGCGT ATCGGTCTTT
CCCGGCTTCA ATCTCATCTA CCTGCGCAAT GACGGAGTGA CCTTCGGGCT TCTCGGCGGC
GCGCCGTGGT GGAGCCTTGT CTTACTGGCG CTTGGCATCT GCGTCTGGCT GGCGTTCATG
CTGGTCCGTA CCAGCAGCCG GGTCGAGGCC ATTGCCTATG GTGCGATCAT CGGCGGTGCA
CTCGGCAATA TTCTGGACCG CCTGCGCTAT CGTGCGGTGA CGGATTTCCT CGATTTCTAC
ATCGGGACGG CGCACTGGCC TGCCTTCAAC ATGGCCGATG TTTTTGTGGT TGGCGGCGTG
ATGCTGCTGC TCATTGCGCC GTGGGTTGGC GCTCGACTTC AGACCGATTC ATGA
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| Protein sequence | MRTCLFVGLL AALIAFLVDQ ATKAIVVSNA TVLSSGVSVF PGFNLIYLRN DGVTFGLLGG
APWWSLVLLA LGICVWLAFM LVRTSSRVEA IAYGAIIGGA LGNILDRLRY RAVTDFLDFY
IGTAHWPAFN MADVFVVGGV MLLLIAPWVG ARLQTDS
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