Gene Dshi_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3605 
Symbol 
ID5714135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp11338 
End bp11982 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content55% 
IMG OID641276523 
Producthypothetical protein 
Protein accessionYP_001541819 
Protein GI159046147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.601046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.599192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAT TTTTCTCTAT CAGTATGCCC GCGGCTCAGT TTGTTAGAAA TGTCCTGCTG 
TTCAGCTTCG CTGCATTACT GCCGGTCCTG TTGTTCTACG TCTTACTGGC TCCGGGCTTT
GCTCCGGCTC TTGCTGCCGG CGGACCGGCA CTCATGCGCT TACTAAGGCA GGTTGCGACC
AACGGTTTGC CCGTGGTTTT TGCCGTCAAC TATGTCAGTT TTTTCCTTTT CGCTATGACA
AAGCAACCAA AGGCGGGCTC AAGAGACACG GCGTTTTTCG TGCTGGTCGA TGTCTTGCTC
AGAGCCCTTC TCTTTCCAGG TCTCCACGTG CTGATATACG TTCTATCTGC CGACTGGTTC
GGGTCATTCG GCGGCAATCG TTCAACCGCT TTGGCGGTTG TATCCCCGAC TCTTGCGCGT
TCGGCGTTTT TCGAGAACAT CTCCGGCGTT TACCTCTATG CGACTATGAT AAGCGCGTTG
CCGCTCTACG TCTCGGCTTT CGGGCGGTCG GAATTTCTTG GACCGGTTGT ACGTCGCTTG
CCCATGAACA CGGGCGTGAT GCTGCTTGCC CTGGCTGCGT TTGCCTTGTC GGTCGGGCTG
ATCACGATCG GCGCACAAGG CATCGCATCT CTTCAGGCCA GGTGA
 
Protein sequence
MDRFFSISMP AAQFVRNVLL FSFAALLPVL LFYVLLAPGF APALAAGGPA LMRLLRQVAT 
NGLPVVFAVN YVSFFLFAMT KQPKAGSRDT AFFVLVDVLL RALLFPGLHV LIYVLSADWF
GSFGGNRSTA LAVVSPTLAR SAFFENISGV YLYATMISAL PLYVSAFGRS EFLGPVVRRL
PMNTGVMLLA LAAFALSVGL ITIGAQGIAS LQAR