Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3605 |
Symbol | |
ID | 5714135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 11338 |
End bp | 11982 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641276523 |
Product | hypothetical protein |
Protein accession | YP_001541819 |
Protein GI | 159046147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.601046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.599192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAT TTTTCTCTAT CAGTATGCCC GCGGCTCAGT TTGTTAGAAA TGTCCTGCTG TTCAGCTTCG CTGCATTACT GCCGGTCCTG TTGTTCTACG TCTTACTGGC TCCGGGCTTT GCTCCGGCTC TTGCTGCCGG CGGACCGGCA CTCATGCGCT TACTAAGGCA GGTTGCGACC AACGGTTTGC CCGTGGTTTT TGCCGTCAAC TATGTCAGTT TTTTCCTTTT CGCTATGACA AAGCAACCAA AGGCGGGCTC AAGAGACACG GCGTTTTTCG TGCTGGTCGA TGTCTTGCTC AGAGCCCTTC TCTTTCCAGG TCTCCACGTG CTGATATACG TTCTATCTGC CGACTGGTTC GGGTCATTCG GCGGCAATCG TTCAACCGCT TTGGCGGTTG TATCCCCGAC TCTTGCGCGT TCGGCGTTTT TCGAGAACAT CTCCGGCGTT TACCTCTATG CGACTATGAT AAGCGCGTTG CCGCTCTACG TCTCGGCTTT CGGGCGGTCG GAATTTCTTG GACCGGTTGT ACGTCGCTTG CCCATGAACA CGGGCGTGAT GCTGCTTGCC CTGGCTGCGT TTGCCTTGTC GGTCGGGCTG ATCACGATCG GCGCACAAGG CATCGCATCT CTTCAGGCCA GGTGA
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Protein sequence | MDRFFSISMP AAQFVRNVLL FSFAALLPVL LFYVLLAPGF APALAAGGPA LMRLLRQVAT NGLPVVFAVN YVSFFLFAMT KQPKAGSRDT AFFVLVDVLL RALLFPGLHV LIYVLSADWF GSFGGNRSTA LAVVSPTLAR SAFFENISGV YLYATMISAL PLYVSAFGRS EFLGPVVRRL PMNTGVMLLA LAAFALSVGL ITIGAQGIAS LQAR
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