| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3603 |
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| Symbol | |
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| ID | 5714133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 7599 |
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| End bp | 9944 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641276521 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001541817 |
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| Protein GI | 159046145 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.385449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC CCGACAGTTC TGAAACCACA GCAGCTTCTT CGGTATTCGT TTGCCCCATG
CACCCTGAGG TGCGGCAGGA CGAGCCCGGC AACTGTCCGA AATGCGGGAT GCACCTCGTG
CCGGAATCGG AGCTCGAGGT CCATTCAGCA CATGATCATC ACGAACACCA CGCGGGTGCC
ACGCCGGCCG ATGGCCGATA TGATCTGGTT CCTACAGGAC ATGATGGTCC CATTTTCACC
TGCCCGATGC ACCCTCAGGT GCGGCAGCCT GATCCGGGCG CGTGTCCGAT CTGTGGTATG
GGATTGGAAC TGGAATCCGG TGTGCCGGGC GATGAAGGTC CAAATCCCGA ACTGGTGGAT
TTCACACGGC GGTTCTGGGT CGGCACAGTC CTGACGATCC CGCTCCTTGT CCTCACGATG
GGGCCATTCG TCGGTTTCCC CGCAGTCCGG ACTTTTTTTG GCGAAAGCAC CACACAATGG
ATCGAATTGA TCCTGGCAAC GCCAGTGGTC TTGTGGTGCG GCTGGCCGTT TCTGGAACGC
GGATGGATTT CGTTCCGCAC ATTGAACCTC AACATGTTCT CCCTGATCGG CATGGGCGTT
CTTGCCGCCT GGCTCTTCAG CGTCGTTGCC GTTCTCGCAC CGGACATATT CCCTGATGGG
TTCCGAGACT CCGAAGGCCA TGTCGGCGTC TATTTCGAGG CGGCGGCGGT GATCGTGACG
CTGGTGCTGC TCGGCCAGGT GATGGAACTA CGCGCCCGCG AGGGGACCGG CAAGGCGATC
CGCGCGCTTC TCGACATGGC GGCAAAGACC GCGCGGGTCA TCCGGGACGA CGGATCCGAG
GAGGAAATCC CGCTGGAGGA CGTGCAAGTC GGGGACCGGC TGCGCGTGCG GCCCGGTGAC
AAGGTGCCGG TCGATGGCGT GGTTCTGGAC GGCCGGTCCT CGGTCGACGA AAGCATGATC
TCCGGTGAAC CCGTGCCGGT CGAGAAGACC GAGGGCGACC CGCTGACCGG CGCGACGATC
AATGGCACCG GCAGTCTGGT GATGGAGGCG ACGCGTGTCG GGTCCGACAC GATGCTGGCT
CAAATTGTCG AGATGGTGTC GAACGCGCAG CGCTCGCGCG CCCCGATCCA GAAATACGCC
GACAAGGTGG CGGGATATTT CGTTCCGGCC GTCATCGGTA TCGCGGTCCT GTCCTTCATC
GCCTGGGCGA TCTGGGGGCC CGCGCCTGCG CTTTCCTACG CATTGATTTC GGCGGTGGCG
GTTCTGATCA TCGCCTGTCC TTGTGCGCTT GGCCTGGCGA CACCGATGTC GATCATGACA
GCGACAGGAC GGGGCGCTCA GGCAGGGGTG CTGATCAAGA ACGCCGAGGC GCTGGAGCGG
TTCGAGAAAG TCGATACCCT GATCGTCGAC AAGACCGGCA CGTTGACCGA AGGCAAGCCG
CGGCTTGTCG ACGTACTCCC GCAACCCGGC CACGACGAAG CCGAGGTCTT GCGTCTCGCC
GCATCGCTTG AGCGCGGATC GGAGCACCCC TTGGCCGAAG CGATCGTCAG GGGTGCGGAG
GAGCGAGATG TCAAAATGGA CGAGGCACGG GACTTCGAGG CGGTCACTGG CAAGGGCGTC
AAGGGGGTCG TTGACGGCAA AGCGGTCGCG CTCGGCAATT TGGCGATGAT CCGCGAATTG
GGGCTCGAGG CGGGCGCGTT GACCGCCAAG GCCAATGCCC GCCGCGACGA AGGCGAGACG
GTCATGTTCG TTGTGCTGGA TGGCGAGATC GCCGGTCTAG TTGCTGTCGC CGACCCAGTG
AAGGAGACCA CGCCAGAAGC CATCGAGGAT CTGCATGAAC TGGGGTTCCG CGTCATCATG
GCGACCGGCG ACAACGAACG CACGGCCAAG GCCATCGGCA CGCGGCTCGG AATCGATGAG
ATCCGGGCCG ACGTGCTGCC GGAGGACAAG GCGCGGATCA TCCTTGAGTT GCAAGAGGCG
GGCCACAAGG TCGCCATGGC CGGGGATGGC GTCAACGACG CCCCCGCGCT CGCGCAGGCC
GATGTCGGCA TCGCCATGGG CACCGGCGCC GATGTGGCCA TCGAAAGCGC GGGCGTCACG
CTGGTCAAGG GCAACCTTGA TGGTATCGTG CGTGCGCGGC GGCTCGCCCG GGCCACGATG
CGCAACATCC GCCAGAACCT GTTCTTCGCG CTGATCTACA ACGCCTCCGG CGTGCCGGTC
GCGGCGGGAG TTCTGTTTCC CTTCTTTGGC ATCCTCATCA GTCCGATGTT TGCTGCCTTC
GCCATGAGCG CGTCGTCAAT CTCGGTGGTG CTCAATTCGC TGCGCCTTCG CGGCGTTCGT
ATCTAG
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| Protein sequence | MSTPDSSETT AASSVFVCPM HPEVRQDEPG NCPKCGMHLV PESELEVHSA HDHHEHHAGA
TPADGRYDLV PTGHDGPIFT CPMHPQVRQP DPGACPICGM GLELESGVPG DEGPNPELVD
FTRRFWVGTV LTIPLLVLTM GPFVGFPAVR TFFGESTTQW IELILATPVV LWCGWPFLER
GWISFRTLNL NMFSLIGMGV LAAWLFSVVA VLAPDIFPDG FRDSEGHVGV YFEAAAVIVT
LVLLGQVMEL RAREGTGKAI RALLDMAAKT ARVIRDDGSE EEIPLEDVQV GDRLRVRPGD
KVPVDGVVLD GRSSVDESMI SGEPVPVEKT EGDPLTGATI NGTGSLVMEA TRVGSDTMLA
QIVEMVSNAQ RSRAPIQKYA DKVAGYFVPA VIGIAVLSFI AWAIWGPAPA LSYALISAVA
VLIIACPCAL GLATPMSIMT ATGRGAQAGV LIKNAEALER FEKVDTLIVD KTGTLTEGKP
RLVDVLPQPG HDEAEVLRLA ASLERGSEHP LAEAIVRGAE ERDVKMDEAR DFEAVTGKGV
KGVVDGKAVA LGNLAMIREL GLEAGALTAK ANARRDEGET VMFVVLDGEI AGLVAVADPV
KETTPEAIED LHELGFRVIM ATGDNERTAK AIGTRLGIDE IRADVLPEDK ARIILELQEA
GHKVAMAGDG VNDAPALAQA DVGIAMGTGA DVAIESAGVT LVKGNLDGIV RARRLARATM
RNIRQNLFFA LIYNASGVPV AAGVLFPFFG ILISPMFAAF AMSASSISVV LNSLRLRGVR
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