Gene Dshi_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3597 
Symbol 
ID5714127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp3107 
End bp3619 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content57% 
IMG OID641276515 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_001541811 
Protein GI159046139 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0122638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.112725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCTGA CACCAAAATC TCTCGGCATG ACTGCGGCGG CAGGATCAGC CGCCTTGCTG 
TTGGGGGCCT TCGTTTTCCA GGCTCTTGGG TACGCGCCGT GCGCAATGTG CATCTGGCAA
CGCTACCCAC ACGCAATCGC CATTGGAATG GGCGCTCTGT TGCTCTTTGC TCTGCCGATT
TTGCCAATCC TGATAATCGG TGCCCTGTCG GTACTCAGCA CATCCGCGTT GGGAGTGTTT
CATACCGGTG TCGAGCGCGG CTGGTGGGAG GGACCGACTT CTTGCACGGG ATCCGGCCTC
GATGTTTCCC AAATGTCGGT ATCGGAATTG CTGCCCTCTG CCAGTTCAAA TACGTCCAAT
CTTGTTCTGT GCAGTGAGGT TGTCTGGGAA TTTCTGACGT TGTCCATGGC CAGTTGGAAC
GCGATCCTAA GCGGTGTCCT TGCTTGCCTC TGGTTGGTCG CGATCGCAAG ACATCAAAAG
GTTCGGTGGC ATGGGGTCGC GGACGTTTCT TGA
 
Protein sequence
MTLTPKSLGM TAAAGSAALL LGAFVFQALG YAPCAMCIWQ RYPHAIAIGM GALLLFALPI 
LPILIIGALS VLSTSALGVF HTGVERGWWE GPTSCTGSGL DVSQMSVSEL LPSASSNTSN
LVLCSEVVWE FLTLSMASWN AILSGVLACL WLVAIARHQK VRWHGVADVS