Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3594 |
Symbol | |
ID | 5714321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 8 |
End bp | 844 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641276512 |
Product | hypothetical protein |
Protein accession | YP_001541808 |
Protein GI | 159046136 |
COG category | [S] Function unknown |
COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0376172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.29662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACTACT CACGATTCTT TATGATGATC GGAACATCGA CCGTGGTCAT GTTCGTTCTG ATGTACCTGA ACACCTATCT TTGGGGCCAT ATCTTCTTTT CGGAGACACG CCTTTACATG GCCATCCTGA TGGGGGCGAC CATGGCCGTG ATCATGTTGG CGTACATGTT GTCCATGTAT CAGAACACCA AAGCCAACAT CGCGATTTTC GTTGGCGCAA TAGTCCTTTT CGCGGCGAGC CTCTGGCTGG TTCGCGGGCA ATTCACGGTG CAGGACAGGT CCTACATGCG CGCCATGATC CCGCACCACT CGATCGCCAT CATGACGTCG ACTCGTGCCG AGATCACCGA CCCGCGCGTC CGGGGGCTCG CAGACGACAT TATCTATGCG CAGGACAAGG AAATCGCCGA AATGCGCTAC CTTATTGCTG ACATTGGAGC AAACGGCGAA GCATCGGCCA CGCGAAGCGA AACGCCGGCG CAGGTTGTGG ATGCGCAACA GGCGCTTCAA ACGGAGGTCG TGTCGAAGGT CGATCCTGAG TTTCTGACGG AAGACGAAAT CGCTGCGGTG TTCCCGAATG GCGGAAATTG CCGCTTTGCT TACACCTCGG ACAGTCCGGC TGTACTGGTG ACTGGTGAAA CCGGCGAAGG GTCTGCCGCC GCAATGAAGA TCAGCGGTGA TCTGGTGCGC CTGAATGCGC AGGGCGAAAA TGCATTTTCT GAAGGCCCGC TGTCGGCCGA GATCGCAGAG ACGAACGGTG ACCTGACCGA TCTGATCGTC AGCGCGGGAA CCGACTACGA AGCCGGGTTC CGTGGTCAAC TTACGTGCAG CGGATAA
|
Protein sequence | MHYSRFFMMI GTSTVVMFVL MYLNTYLWGH IFFSETRLYM AILMGATMAV IMLAYMLSMY QNTKANIAIF VGAIVLFAAS LWLVRGQFTV QDRSYMRAMI PHHSIAIMTS TRAEITDPRV RGLADDIIYA QDKEIAEMRY LIADIGANGE ASATRSETPA QVVDAQQALQ TEVVSKVDPE FLTEDEIAAV FPNGGNCRFA YTSDSPAVLV TGETGEGSAA AMKISGDLVR LNAQGENAFS EGPLSAEIAE TNGDLTDLIV SAGTDYEAGF RGQLTCSG
|
| |