Gene Dshi_3594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3594 
Symbol 
ID5714321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp
End bp844 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID641276512 
Producthypothetical protein 
Protein accessionYP_001541808 
Protein GI159046136 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0376172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.29662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACT CACGATTCTT TATGATGATC GGAACATCGA CCGTGGTCAT GTTCGTTCTG 
ATGTACCTGA ACACCTATCT TTGGGGCCAT ATCTTCTTTT CGGAGACACG CCTTTACATG
GCCATCCTGA TGGGGGCGAC CATGGCCGTG ATCATGTTGG CGTACATGTT GTCCATGTAT
CAGAACACCA AAGCCAACAT CGCGATTTTC GTTGGCGCAA TAGTCCTTTT CGCGGCGAGC
CTCTGGCTGG TTCGCGGGCA ATTCACGGTG CAGGACAGGT CCTACATGCG CGCCATGATC
CCGCACCACT CGATCGCCAT CATGACGTCG ACTCGTGCCG AGATCACCGA CCCGCGCGTC
CGGGGGCTCG CAGACGACAT TATCTATGCG CAGGACAAGG AAATCGCCGA AATGCGCTAC
CTTATTGCTG ACATTGGAGC AAACGGCGAA GCATCGGCCA CGCGAAGCGA AACGCCGGCG
CAGGTTGTGG ATGCGCAACA GGCGCTTCAA ACGGAGGTCG TGTCGAAGGT CGATCCTGAG
TTTCTGACGG AAGACGAAAT CGCTGCGGTG TTCCCGAATG GCGGAAATTG CCGCTTTGCT
TACACCTCGG ACAGTCCGGC TGTACTGGTG ACTGGTGAAA CCGGCGAAGG GTCTGCCGCC
GCAATGAAGA TCAGCGGTGA TCTGGTGCGC CTGAATGCGC AGGGCGAAAA TGCATTTTCT
GAAGGCCCGC TGTCGGCCGA GATCGCAGAG ACGAACGGTG ACCTGACCGA TCTGATCGTC
AGCGCGGGAA CCGACTACGA AGCCGGGTTC CGTGGTCAAC TTACGTGCAG CGGATAA
 
Protein sequence
MHYSRFFMMI GTSTVVMFVL MYLNTYLWGH IFFSETRLYM AILMGATMAV IMLAYMLSMY 
QNTKANIAIF VGAIVLFAAS LWLVRGQFTV QDRSYMRAMI PHHSIAIMTS TRAEITDPRV
RGLADDIIYA QDKEIAEMRY LIADIGANGE ASATRSETPA QVVDAQQALQ TEVVSKVDPE
FLTEDEIAAV FPNGGNCRFA YTSDSPAVLV TGETGEGSAA AMKISGDLVR LNAQGENAFS
EGPLSAEIAE TNGDLTDLIV SAGTDYEAGF RGQLTCSG