Gene Cmaq_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1998 
Symbol 
ID5708686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2074390 
End bp2074851 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content46% 
IMG OID641276507 
Producthypothetical protein 
Protein accessionYP_001541803 
Protein GI159042551 
COG category[S] Function unknown 
COG ID[COG4933] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.951524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTAA TCCTAATGTC CATTAAGCCA GGCTTCGGCG ACGCAATACT GGATGGTAGG 
AAGAAGGCTG AGTTAAGGAG ACTTGTGAAT GGCCCAGTAA CCCCAGGGGA CACTGTGGTT
CTTTACTTAT CATCACCCAG GAAGGCCATT GAGGGATTCT TCAAGGCTGA GAGGGTTTAC
ATTGGTAGGA GGAGTGAGTT AATGCGGATT GCCAAGGGGC TTAATGACCT TGGTTTAAGG
GAGGGGGATT GGAATTACGT TGATGAGGAT AGGGAGGGAA TGATGATTAT TGTTTCAGAA
CCAAGAAGAT GCATTAAGCC ACTCACCCTG GATCAATTAA TCAGCGTATT CCCCTGGTTT
AAACCACCCT TAAGCTACAT TAGGCTTAAG CCGAATAGCG ACATCTACTG GTTAATCTTC
AGGAGATGTA TTGAGCCGTA CTTCAGAAGC CTATGGAAGT AG
 
Protein sequence
MELILMSIKP GFGDAILDGR KKAELRRLVN GPVTPGDTVV LYLSSPRKAI EGFFKAERVY 
IGRRSELMRI AKGLNDLGLR EGDWNYVDED REGMMIIVSE PRRCIKPLTL DQLISVFPWF
KPPLSYIRLK PNSDIYWLIF RRCIEPYFRS LWK