Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1998 |
Symbol | |
ID | 5708686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 2074390 |
End bp | 2074851 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641276507 |
Product | hypothetical protein |
Protein accession | YP_001541803 |
Protein GI | 159042551 |
COG category | [S] Function unknown |
COG ID | [COG4933] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.951524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTAA TCCTAATGTC CATTAAGCCA GGCTTCGGCG ACGCAATACT GGATGGTAGG AAGAAGGCTG AGTTAAGGAG ACTTGTGAAT GGCCCAGTAA CCCCAGGGGA CACTGTGGTT CTTTACTTAT CATCACCCAG GAAGGCCATT GAGGGATTCT TCAAGGCTGA GAGGGTTTAC ATTGGTAGGA GGAGTGAGTT AATGCGGATT GCCAAGGGGC TTAATGACCT TGGTTTAAGG GAGGGGGATT GGAATTACGT TGATGAGGAT AGGGAGGGAA TGATGATTAT TGTTTCAGAA CCAAGAAGAT GCATTAAGCC ACTCACCCTG GATCAATTAA TCAGCGTATT CCCCTGGTTT AAACCACCCT TAAGCTACAT TAGGCTTAAG CCGAATAGCG ACATCTACTG GTTAATCTTC AGGAGATGTA TTGAGCCGTA CTTCAGAAGC CTATGGAAGT AG
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Protein sequence | MELILMSIKP GFGDAILDGR KKAELRRLVN GPVTPGDTVV LYLSSPRKAI EGFFKAERVY IGRRSELMRI AKGLNDLGLR EGDWNYVDED REGMMIIVSE PRRCIKPLTL DQLISVFPWF KPPLSYIRLK PNSDIYWLIF RRCIEPYFRS LWK
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