Gene Cmaq_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1988 
Symbol 
ID5708552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2063115 
End bp2064170 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content41% 
IMG OID641276498 
Producthypothetical protein 
Protein accessionYP_001541794 
Protein GI159042542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.705196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA AGTTAATCAC AGTGACTGTA ATAATAGTGG TACTGGTGAT AATAGGTGTA 
GGTGCGTTGC TTTTAATTCA TAAGCCCTCA GTGAGCCAGG CTCAGGAGCT ACCCATTAAT
ATGACTGCGT TAATTAACCT ATGTCGTTCA AGTCAGTTTA ACATTACGTT AATCTCAACC
AGTGCCTCGC AAGCATACTT GTCTAGGTAT GTAACTACAT TAAGTGACGT TAGGTTGAGT
TACAGGATTG AGAATAACCT CTACAATGTG GCTTCCTTCA ATGGTGTATC CTACTTAGCC
TTTAATCCAT TAAACGGCTC ATTATGCTAC TACGGTAACT TCACTAATGT TCAGGATAAG
GGGGTTGCTC AATGGGCTTA CCCTGAAATA ATAATTGTTG GTTACAAGCC TTGGGATGGT
TACCCAGTTT ACAATCTACG TAATCCTAAT TTAACATTAC CAGCTAAGAT TAGTGAACTG
CTTCAACCTA ATGGTGGCGG TTATGATTGG ATTAAGTTAA CTTACTCAGT GGCGTATTCA
CCAAGCACAT TCCCGGAGGA CTTCGCCTTC GATATTTGGA TACTGCATAA TCCAAGCGAA
GTTGGGACTG TTACTAAACC TGACTTAGAG TTGATGATTT GGTTATTCTT CAATAACACC
GGCATAACAT GGGCTAAGGT TGGGGAGACT AAAATACCAA TCATAGTTAA TGGTGTTTAT
AGTAATGTGA CTTGGGCAGT ATTAGTCTCA TGTAACTTCC CATGGACTTA CGTCGCAGTA
GTACCACAGG ACACCGGCAA CACTACAATA GCTGGTGGAT GGAGGGCTGC AACGGTTGAA
TTTCAGTTAG CCCCATTCTT AAATGCAATC CTTCAATTCG TACCCAATGA GAAATGCGGG
ACAGGCTTAC CAAATTACCC AATTAAGGAT AAGGCTTACC TAGAGAACTT AACCATGGTT
GATATTGAAC TTGGAATAGA ATTCGGGAAC ATGCATATTA AGAATGGGGA AGTCGGCTAT
TACCTTAAGG GCATTAGTAT ACTCAAGGAG AGGTGA
 
Protein sequence
MNTKLITVTV IIVVLVIIGV GALLLIHKPS VSQAQELPIN MTALINLCRS SQFNITLIST 
SASQAYLSRY VTTLSDVRLS YRIENNLYNV ASFNGVSYLA FNPLNGSLCY YGNFTNVQDK
GVAQWAYPEI IIVGYKPWDG YPVYNLRNPN LTLPAKISEL LQPNGGGYDW IKLTYSVAYS
PSTFPEDFAF DIWILHNPSE VGTVTKPDLE LMIWLFFNNT GITWAKVGET KIPIIVNGVY
SNVTWAVLVS CNFPWTYVAV VPQDTGNTTI AGGWRAATVE FQLAPFLNAI LQFVPNEKCG
TGLPNYPIKD KAYLENLTMV DIELGIEFGN MHIKNGEVGY YLKGISILKE R