Gene Cmaq_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1980 
Symbol 
ID5710011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2054790 
End bp2055641 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content44% 
IMG OID641276490 
Producthypothetical protein 
Protein accessionYP_001541786 
Protein GI159042534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.463491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.74257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTTA TTTGGTGCAG GGAGATGAGT AGGCTAAGTG GTGGTTTGAT TTACTCTATT 
GCGTTGGCCT TGGTGTGGGG TGTGGCGTAT CCGCTTACAA GGATGGCTGA GGCTTATGCT
TCGCCTATGG TTATTTCAGT GGTTAGGGTG GGTGCCGCCT CATTACTCAT GTATCCTTTG
GCTAGGAGGC TTATATTGAA TTCAAGGATG CTTATAGTGT CGGTGCTTAA CATGGGGCTT
TTCCTGGTTT TGATAAACAT GTCAATACTC TACTCCCCTA ATCCAGGTTT AGCGGCGTTA
ATGATATATA CGCAGCCGCT TTTTGTGGCT GTTTTTGAGT GGTTGATGCT TAAACGTAGG
TTGAGTTTAA TGAGGATTGG GGGTGTTTTA TTGGGTTTCA TGGGGGTTGC TGTGGCTTCA
TTGAGTTCAC TGTCCCTTAG CCTTGGGGTG GTTGTGGGTT TAATGGCTGG TTTACTGTGG
GGTCTTGGGA CTGTTCTTTA CTCAATGTGG TTTAGGGATG TTAACCCATT GGTGGCTAAT
GCATCATCAT CAGTATTATC AATACCTGTG ACTGCATTGG CTTTACCCAT TGATCCTGCA
TTATCCTTAA CCATTAAGGG TATTTTACTG ATTCTTCTAG TGGTGCTTGA TGCCCAGGTA
CTAGGCTTCA TGCTCTGGTT TAAGGCAATT AGCAGTGAGA GGCCGAGTAC AGTATCGTCA
ATACTACTCT TAACACCAAT ACTAGCCCTC TACTTCAGTG CATTAATGAT TAAATCAAGT
GTAACACCCC TTGAAGTAGT GGGTGCAGTG ATTACTATCA TTGGCTTATT CATGGTTGTT
AAATCCAGTT AA
 
Protein sequence
MWVIWCREMS RLSGGLIYSI ALALVWGVAY PLTRMAEAYA SPMVISVVRV GAASLLMYPL 
ARRLILNSRM LIVSVLNMGL FLVLINMSIL YSPNPGLAAL MIYTQPLFVA VFEWLMLKRR
LSLMRIGGVL LGFMGVAVAS LSSLSLSLGV VVGLMAGLLW GLGTVLYSMW FRDVNPLVAN
ASSSVLSIPV TALALPIDPA LSLTIKGILL ILLVVLDAQV LGFMLWFKAI SSERPSTVSS
ILLLTPILAL YFSALMIKSS VTPLEVVGAV ITIIGLFMVV KSS