| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1974 |
|---|
| Symbol | |
|---|
| ID | 5708570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 2051581 |
|---|
| End bp | 2052132 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641276484 |
|---|
| Product | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase |
|---|
| Protein accession | YP_001541780 |
|---|
| Protein GI | 159042528 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACCT TAAGGTTCGT GACTAGGAAT CAACATAAGT TGAAGGAGGC TACTTCAATA
CTCTCCCAGT ACGGTATAAG TATAGTGATG GAGAATTCGA TTAATAAGGT TGAGATTCAG
AGTGATAGCT TGGAGGAGAT CGTTAATTAC GCTCTTAGGT TAAATTGCGT TGATTGGCTT
GTCGTTGAGG ATGACGGCTT ATTCGTGGAT TCCCTTAACG GTTTCCCCGG ACCCTACTCA
GAGTACGTTT ATAGGACAAT AGGGTTAAGG GGCCTGTTGA GGCTTCTTCA AGGCTCAAGG
GACAGGGGTG CGTACTTTAA GTCCGTTGTG GGCTTATGCA TTAATAATGA GGTTAAGTTA
TTCACAGGTA TTGTTAAGGG TAGGTTAAGT GAGGAGCCGA GGGGTAGTAG TGGGTTTGGG
TATGACCCAG TCTTCATTCC CGAGGGCTAT GACTTAACGT TCGCTGAGAT GGGTGAGGAT
TTAAAGAATA AGTTGTCGCA TAGGTCAAGG GCCTTCAATA ATTTAGCAAC CTACTTAACC
AGGATTAATT AA
|
|---|
| Protein sequence | MVTLRFVTRN QHKLKEATSI LSQYGISIVM ENSINKVEIQ SDSLEEIVNY ALRLNCVDWL
VVEDDGLFVD SLNGFPGPYS EYVYRTIGLR GLLRLLQGSR DRGAYFKSVV GLCINNEVKL
FTGIVKGRLS EEPRGSSGFG YDPVFIPEGY DLTFAEMGED LKNKLSHRSR AFNNLATYLT
RIN
|
|---|
| |