Gene Cmaq_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1973 
Symbol 
ID5708569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2050132 
End bp2051559 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content47% 
IMG OID641276483 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_001541779 
Protein GI159042527 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.684212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGATG AATTAAGGAG GCTTCTAGAT AAGGCCCTCA GCCTAGGTGC CTCATACGCT 
GAGGTTAGGT ATCAGGTTGA TTCAGAGAGG AGTATTAGGG TTAGGAATGG TGTACTTGAA
ATGTCATCAA CAGACTCAAC GGAGGGGTAT TCGGTTAGGG TACTTTACAA GGGGGCCTGG
GGCTTCTCCT CTGGGCCAAG TCCATCAATT GAGCTTGCTG AAACCGCCTT CAAGATGGCT
AGGGCAGCAT CCTTATTAAA GCCTAAGGGT GCTTCACTAG CCCCCGGTGA GTTAGCATCA
TTAAGGTATG ATGTTGTTGA GAAGGTTAAA CTCAATGATG TTCAAATTGA GGATGCCGTA
AAGTACATGA TGGATTTAGA CAAGGCAATT AACGTGGATA AGAGACTAAC CGTTAGGATA
CTTAACTTAA ACATGATGGA GACTAGGAAA ACCATAATTA ATAGTGAGGG GGCATTAGTG
GAGAGTAGGG TTCCTAGGCT TGAGTTATTC ATGATAATTA TAGCCCATGA CCCAGGTAGG
GGACTTAGCC AACAGAGAAG CGAACAATAC GGTGGTAGTG GTGGTTGGGA GTTGACGAAA
ACCCTCCGCA TAGAGGAGGA TGCCAAGGGG AATGCTGAAA CATTGGTTAA AATCATTGAT
GAGGCGAAGC CCATTAAGAG TGAGGAGAAG CTTGACGTAG TATTCTCACC TGAGTTGGCG
GGTATATTTG TTCACGAATC CATAGGCCAC CCCAGTGAGC TAGATAGAAT AATGGGTAGG
GAGGGGGCGG AGGCTGGGGA ATCATACATG AAGCCCAGTG ACCTAGGGAA TTTGAGAATT
GGAAGTGAAC ACGTCACCAT AATTGATGAT CCAACGATAC CGAATAGCTA CGGTTACTAC
CTGGTTGATG AGGAGGGGGT TAAGGCTAGG CCTAGGATCC TTGTTAATAA GGGTGTTGTT
AATGAATTCC TAATGAATAG GGAGTACGCG GCGTACATTG GGGCACGTAG TAATGCCGCG
GCTAGGGCAA GTGAATTCAA TAGGGAGCCG ATACCGAGAA TGGCTAATAC TTACTTAGCC
CCAGGTGATT GGAAGCCTGA GGAGTTGATT AGGGAGACTA GGAATGGGTT GTATTTCGTT
TCTTACCAGG AGTGGAACAT TGATGATAGG AGGTGGTTCG GTAGGTATGG TGGATTGGAG
GCTTATAGGA TTACTAACGG TGAATTAGGT GAATTAGTTC TAATGCCGTA CGTGGAGTTA
ACCACCAAGG CCCTTTGGAG TAGTGTTGAC GCAGTGGCCA ATGACCTATC CTTCAACGCC
GGTACCTGCG GTAAAGGTAA CCCATCGCAG GGTGTACCCG TGTGGTTTGG TGGCGTAACC
TTTAGGGCTA AGAATATACT GGTTAAGCCC CCTGTCTTAA ATCAATAA
 
Protein sequence
MEDELRRLLD KALSLGASYA EVRYQVDSER SIRVRNGVLE MSSTDSTEGY SVRVLYKGAW 
GFSSGPSPSI ELAETAFKMA RAASLLKPKG ASLAPGELAS LRYDVVEKVK LNDVQIEDAV
KYMMDLDKAI NVDKRLTVRI LNLNMMETRK TIINSEGALV ESRVPRLELF MIIIAHDPGR
GLSQQRSEQY GGSGGWELTK TLRIEEDAKG NAETLVKIID EAKPIKSEEK LDVVFSPELA
GIFVHESIGH PSELDRIMGR EGAEAGESYM KPSDLGNLRI GSEHVTIIDD PTIPNSYGYY
LVDEEGVKAR PRILVNKGVV NEFLMNREYA AYIGARSNAA ARASEFNREP IPRMANTYLA
PGDWKPEELI RETRNGLYFV SYQEWNIDDR RWFGRYGGLE AYRITNGELG ELVLMPYVEL
TTKALWSSVD AVANDLSFNA GTCGKGNPSQ GVPVWFGGVT FRAKNILVKP PVLNQ