Gene Cmaq_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1969 
Symbol 
ID5708443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2045713 
End bp2046378 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content45% 
IMG OID641276479 
Producthypothetical protein 
Protein accessionYP_001541775 
Protein GI159042523 
COG category[R] General function prediction only 
COG ID[COG1634] Uncharacterized Rossmann fold enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.628894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAC TGGGAATGAG GAGGAGCATA GTACTGGATC CCCTTGAATC ACACCTCTCT 
AGGTTAGTTT ACATGAGGGT TATGAGCGGC TTAGGCCTAA ACTTCAGTAA TGACGCAAAG
GCAGCTGAAC TAGCCAGCCA CTACTGCAGC GGTGACCCGG ATCAATTATG GTCCTTAAAC
TGGGAAACAG TGACAATCTA CATGCCGCCT TATGCCGGTG AACCTAATCC ACGTGGATTA
ATTATAGCTG TTGAGGGTTA TACACTACGT AGGCTACTTA ATGATGGTGT CGTCCCCGAC
ATAGTTGTCA CCGACTTTGA TTATGAACCA GATAGCCTAA TTGGGTTTAA GGGCATTGTT
ATTGGTCACG CCCATGGTGA CAACGTGAAT GCGTATGTTA AGTATGCTAG GCACGTAAGT
AGGCTAATAC CAAGTGTCCA GGTTTGGCCA GTGGACTGCT CAATCCTAGT ACCAGGCTTC
ACTGATGGTG ATAGGGCGGT TTACCTAGCC GCCTACATGG GTTCACGGCG AATTACAGTA
AGGGGGTTTA ACCCCGATGC ACCAATTAAG AGGAGTGATG AGGTTAAGAG GATGAAGCTT
AAGTTAGCTG AATACTTCAT TAATAGGGCA AGTAGGTTAA CTAATATTAG TATTAGTAAG
TATTAG
 
Protein sequence
MSALGMRRSI VLDPLESHLS RLVYMRVMSG LGLNFSNDAK AAELASHYCS GDPDQLWSLN 
WETVTIYMPP YAGEPNPRGL IIAVEGYTLR RLLNDGVVPD IVVTDFDYEP DSLIGFKGIV
IGHAHGDNVN AYVKYARHVS RLIPSVQVWP VDCSILVPGF TDGDRAVYLA AYMGSRRITV
RGFNPDAPIK RSDEVKRMKL KLAEYFINRA SRLTNISISK Y