| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1968 |
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| Symbol | |
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| ID | 5708442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 2044154 |
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| End bp | 2045629 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641276478 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001541774 |
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| Protein GI | 159042522 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.632276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATTA ATAATGCGGA GTATGACCTT AAGTACGCCT ATAGGGCAAT GGTCATACTT
GCCTCATTAG CGGTAATAGT AATGTATATA GAAGGCATGT TAATACCGTC ATTAACTGAA
ATAGAGAGGG AGTTCGGGGT AACCTCAAGT CAAGTTAGTT GGGTCCTCTC ATCATACCTA
CTCTCCGGTA CTGTTCTACT ACCAATAGTG GGTAGGCTTG GTGACATTTA CGGTAAGAAG
AGGGTTCTCT CAGCAGTGGT CATAATATAC GCTGTGGCAG TCACATTAAC CAGTGTATCA
CCCAGTTTCA CGTACTTAAT AGCCTTCAGG GGTATTCAAG GTATTGGAGT AACCATGTTC
GCATTAGCCT TCAGTCTAAT CAGGGAGGAG TTTCCAAGGG AATTAATACC AAGGGCTCAG
GGATTGGTGA GTGCAGCCTT TGGAATTGGT GCGGCAATAG CACTACCCCT GGGCGCATAC
ATAAGCCAGT ACTTTGGTTG GAGAACAACA TACCACACAG CCATACCCTT CGTACTGCTG
GTGGCGTACC TAATAGTGAC TAGGATAAAG GAGTCAAGGT ACAGGAACCC TAGTGCTAAG
GTTGATTTAC CTGGGGCAGC GGTACTTGGA ATTGGATTAG GCCTGGTGGT TTACGGATTA
ACCGAGGCAC CCATATGGGG TTGGACTAAC CCGAACACGA TAATAACCTT CCTAGCGGCC
CTCATATTCA TAGGAGCCTT CATAGCCGTA GAGAGGAGGA GGGAGCAGCC GTTAATTAAC
CTATCATTAT TAACTAGGAG AAACGTGTTA ATAGCTAATC TAGCCGCAAT GGTGGCTGGC
TTCGGCCTCT TCCTATTTGA ACAAAGCCTA ATAATACTCC TCGAGGAGCC TAAGCCCGTT
GGCTTCAACC TATCCATATT CGATACCGGC TTATACGCAA TCCCCATGGC TGTGGCGCAG
TTAATAGTCG CCCCAGTTGC AGGCATATTA ATAACTAGGA TAGGGGCTAG GAGAATGCTC
ATGACTGGGG CAAGTATAGC CGCCTTATTC AGCCTAATAA CCGCCGCCGT GGCCCCCCTG
GGTTTAGGGG CTTTGATAAC ATCAACAACA TTAGCCATGG CTGGGGTAGC GGCAATGAAT
GTATCCCTCA TTAATATCCT TGTTTTCTCA GTGGAACCGC AGGTAATGGG GGTTTCAACA
GCAATGAACT CAGTCTTCAG GAACCTGGGT GGTACCCTAG GCCCAGCGGT GGCTGGTTCA
CTTGAGTCAA CATTCACATC ACTGGTTCTA ATGGGTATAC TGCCGGGGCG TAATGTGCCG
CTCTTAGTTA CAGTGCCATC AATGTACGCC TTCCAGATTG GTGCAGTAAT CTCAGCCTTA
ACAGTGGTAA CGATAGGTAT ATTGGCTTAC TTCTCAGTGG AGGTCATAAC CTGGAGAAAT
GAATCCCAGA CTGTCGCCTC ATTAAGCCAG GAGTAG
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| Protein sequence | MLINNAEYDL KYAYRAMVIL ASLAVIVMYI EGMLIPSLTE IEREFGVTSS QVSWVLSSYL
LSGTVLLPIV GRLGDIYGKK RVLSAVVIIY AVAVTLTSVS PSFTYLIAFR GIQGIGVTMF
ALAFSLIREE FPRELIPRAQ GLVSAAFGIG AAIALPLGAY ISQYFGWRTT YHTAIPFVLL
VAYLIVTRIK ESRYRNPSAK VDLPGAAVLG IGLGLVVYGL TEAPIWGWTN PNTIITFLAA
LIFIGAFIAV ERRREQPLIN LSLLTRRNVL IANLAAMVAG FGLFLFEQSL IILLEEPKPV
GFNLSIFDTG LYAIPMAVAQ LIVAPVAGIL ITRIGARRML MTGASIAALF SLITAAVAPL
GLGALITSTT LAMAGVAAMN VSLINILVFS VEPQVMGVST AMNSVFRNLG GTLGPAVAGS
LESTFTSLVL MGILPGRNVP LLVTVPSMYA FQIGAVISAL TVVTIGILAY FSVEVITWRN
ESQTVASLSQ E
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