| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1945 |
|---|
| Symbol | |
|---|
| ID | 5709680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 2023315 |
|---|
| End bp | 2023773 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641276452 |
|---|
| Product | 30S ribosomal protein S26e |
|---|
| Protein accession | YP_001541751 |
|---|
| Protein GI | 159042499 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4830] Ribosomal protein S26 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATAT TCGTGCCTAA GAAGAGGAAA AACAGGGGGA GACATAAGGG AGATAAGGGT
AAGGAGTCGA TAGTTTACTG CGATAATTGC GGTAAAATGA TACCTAGGTC AAAGGCAGTT
AGGGTAACTG TACCCTACTC ACCAATACCG ACTGACTTAG CTAAGGAGCT TGAGAAACAG
GGGGCGATAG TGCCAAGGTA CTACATTACC AAGACCTACT GCGTCAACTG CGCAATCTAC
CTTGGGATAA TTAAGGTTAG GTCTGAGGAT GAGAGGAAGA GTAAGAAGCC AATACTAAGG
GGGCAACAGA GGCCGCAAAG GCAATTACCA GTGGCAGCCT CAGCGGCTGC TGCACCAGCG
GCATCAACAG CATCACCAAC TCAACCAACT GAAGGTAATG CGCAGGCTGA GTCAAATAAT
AAGCCAAGTG AGAATACTAG TCAAAGCACC TCGAAGTAA
|
|---|
| Protein sequence | MVIFVPKKRK NRGRHKGDKG KESIVYCDNC GKMIPRSKAV RVTVPYSPIP TDLAKELEKQ
GAIVPRYYIT KTYCVNCAIY LGIIKVRSED ERKSKKPILR GQQRPQRQLP VAASAAAAPA
ASTASPTQPT EGNAQAESNN KPSENTSQST SK
|
|---|
| |