Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1921 |
Symbol | |
ID | 5708845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1998407 |
End bp | 1999042 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641276429 |
Product | hypothetical protein |
Protein accession | YP_001541728 |
Protein GI | 159042476 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4998] Predicted endonuclease (RecB family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTAGTG GGGTTAGGTT TGAGGATTAT GTTGCTGAAT TGCTTAGCAG GCTTGGGTTC AGGGTAATGG ATAGGAGGGT TAAGGTTACT AGTAATGGTG TTGAGGTTGG TGAGGTGGAT TTAATAGTTG AGGATGAGTG TGGTAATAAG TACTCCGTTG AGGTTAAGTC AGGTAAGGTT GATGTGAGTG GGGTTAGGCA GGCATACACT AATGCTAAGT TAATTAACGC TAAGCCCCTA ATTGTGGCTA GGGGGTTTAG TAATGACTCC AGTAGGGTCC TTGCCGAGGA GCTTGGGGTT AGGGTTATTG ATCTTGAGGA GGCCATTGTC CTTAAGCCTG ATGAATTAAG GACAGCGGTT GAATCAGCCA TATACGGGTT AATTGAGGAG GTTGCTGATG CATTAACCGC ATTAATGAGT AATCAAAGAG GCGTGGGTGA GGTTATGGAT GCCGTAGCCC AATGCAGCGA CTGGAGTTGC GTATGCGGTA GGCTTGGGTT AAGTGAAGGG GAGTGCGGTA GGTGGATTAA TGAATTAAGG AGTGAATTAG GGCTTAGGGT ATCCTCAATA AGAACCCTTA GGGCAGTGGT TAAATTATAT AGACTACTCC AAGGCATGCT AAGGGCTAAC GCTTAA
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Protein sequence | MSSGVRFEDY VAELLSRLGF RVMDRRVKVT SNGVEVGEVD LIVEDECGNK YSVEVKSGKV DVSGVRQAYT NAKLINAKPL IVARGFSNDS SRVLAEELGV RVIDLEEAIV LKPDELRTAV ESAIYGLIEE VADALTALMS NQRGVGEVMD AVAQCSDWSC VCGRLGLSEG ECGRWINELR SELGLRVSSI RTLRAVVKLY RLLQGMLRAN A
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