Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1917 |
Symbol | |
ID | 5709299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1994383 |
End bp | 1995642 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641276425 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001541724 |
Protein GI | 159042472 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCGA GACTAATCTT CGACGGTATA AGCGTTGAAC CGAATACACC AAGTGAATTA TACATAACCG ACACAACCTT CAGGGATGGG CAGCAGGCCT TCTACGCATA CAGCCCAAGT GACGTTAAGG GGCTTTTCAA ACTACTCTCA GAGCTTGATA ACGGTAGTGG GAGGTTGAGT AGGAGTGAGT TCTTCCTATA CACTGAGAGG GATAGGAGGA TTGTTAATGC TGTTAAGGGC CTTGGCTTAA AGTACCCTAA GGTTATTGGA TGGGGTAGGG CTAGGGTTGA GGATGTTAGG TTGGTTAAGG AGAGTGGGTT AGATGAAATG GTTATGTTAA TGTCAATATC AGACATCCAC ATTAAGGCCA AGTTCAACAC CACTAGGGCT AGGGTGGTTG AGAAGTACCT TGAAGCCGCT GAGGAGGCCA TGAGGAGCGG CATAGCCTTA AGATGCAGTC TAGAGGATGT AACCAGGGCT GATGTATTAG GATTCGTAGT ACCCTTCGTT AATAAGTTGC TTAGGCTTAG GGATAAGTAC GGTGCATCCC TAGTAATTAA GCTCCCTGAC ACAACAGGCG TGGGTGTACC ATACCCCACA GCCTCACTAC CCTACAGTAT ACCTAAGTTA ATATGGGTAA TGAGGAGCCT ACTCAAGATA CCCAGCAATG CCTTGGAGTT TCATGGACAT GGGGACTACC ACATGGCTGT AGCCAACGCA GTGGCTGCTT GGGTTTACGG GGCGGGGATT AATAATGGGA CACTACTGGG TATTGGGGAG AGGGCGGGTA ACGTACCCAT TGAGGCCCTT GTGGTTTGGT ACAGTAGGCT TAAGGGCTCC TTCGACGGTA TGGAGCCTAG GGTTATTTCA AGGATCGTGG AGTACTTTAA GGGCATGGGG TATAGTGTAC CTAGGCATCA ACCAATAGTG GGTAGTAACG CCTACGCCAC GGCTGCGGGT ATTCACATTG ATGCTCAATC CAAGGACCCT GAAACCTACC TATCCATGGA TCCCTCACTG GTCGGTATGA GGGAGACTAT TCTAATAGGC CCATACACGG GTAGGTCTGG GATTGCGCAT GTGCTTAAGG GTATTGGGGT TAATGCCGGT AAGAATGATG AGACCGTGGA GAGGGTTTAT AGGGCAGTAG TTAGGCTTTA CGACGAGGGC CGTTTAAGGG AACCAATGAG TGAGGAGGAG TTCATTAAGT CAATGAGTGG GTTAATTAAT GGGGAATCAG TGAAGTTTAA TGAGACTTAA
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Protein sequence | MPPRLIFDGI SVEPNTPSEL YITDTTFRDG QQAFYAYSPS DVKGLFKLLS ELDNGSGRLS RSEFFLYTER DRRIVNAVKG LGLKYPKVIG WGRARVEDVR LVKESGLDEM VMLMSISDIH IKAKFNTTRA RVVEKYLEAA EEAMRSGIAL RCSLEDVTRA DVLGFVVPFV NKLLRLRDKY GASLVIKLPD TTGVGVPYPT ASLPYSIPKL IWVMRSLLKI PSNALEFHGH GDYHMAVANA VAAWVYGAGI NNGTLLGIGE RAGNVPIEAL VVWYSRLKGS FDGMEPRVIS RIVEYFKGMG YSVPRHQPIV GSNAYATAAG IHIDAQSKDP ETYLSMDPSL VGMRETILIG PYTGRSGIAH VLKGIGVNAG KNDETVERVY RAVVRLYDEG RLREPMSEEE FIKSMSGLIN GESVKFNET
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