Gene Cmaq_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1917 
Symbol 
ID5709299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1994383 
End bp1995642 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content48% 
IMG OID641276425 
Productpyruvate carboxyltransferase 
Protein accessionYP_001541724 
Protein GI159042472 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCGA GACTAATCTT CGACGGTATA AGCGTTGAAC CGAATACACC AAGTGAATTA 
TACATAACCG ACACAACCTT CAGGGATGGG CAGCAGGCCT TCTACGCATA CAGCCCAAGT
GACGTTAAGG GGCTTTTCAA ACTACTCTCA GAGCTTGATA ACGGTAGTGG GAGGTTGAGT
AGGAGTGAGT TCTTCCTATA CACTGAGAGG GATAGGAGGA TTGTTAATGC TGTTAAGGGC
CTTGGCTTAA AGTACCCTAA GGTTATTGGA TGGGGTAGGG CTAGGGTTGA GGATGTTAGG
TTGGTTAAGG AGAGTGGGTT AGATGAAATG GTTATGTTAA TGTCAATATC AGACATCCAC
ATTAAGGCCA AGTTCAACAC CACTAGGGCT AGGGTGGTTG AGAAGTACCT TGAAGCCGCT
GAGGAGGCCA TGAGGAGCGG CATAGCCTTA AGATGCAGTC TAGAGGATGT AACCAGGGCT
GATGTATTAG GATTCGTAGT ACCCTTCGTT AATAAGTTGC TTAGGCTTAG GGATAAGTAC
GGTGCATCCC TAGTAATTAA GCTCCCTGAC ACAACAGGCG TGGGTGTACC ATACCCCACA
GCCTCACTAC CCTACAGTAT ACCTAAGTTA ATATGGGTAA TGAGGAGCCT ACTCAAGATA
CCCAGCAATG CCTTGGAGTT TCATGGACAT GGGGACTACC ACATGGCTGT AGCCAACGCA
GTGGCTGCTT GGGTTTACGG GGCGGGGATT AATAATGGGA CACTACTGGG TATTGGGGAG
AGGGCGGGTA ACGTACCCAT TGAGGCCCTT GTGGTTTGGT ACAGTAGGCT TAAGGGCTCC
TTCGACGGTA TGGAGCCTAG GGTTATTTCA AGGATCGTGG AGTACTTTAA GGGCATGGGG
TATAGTGTAC CTAGGCATCA ACCAATAGTG GGTAGTAACG CCTACGCCAC GGCTGCGGGT
ATTCACATTG ATGCTCAATC CAAGGACCCT GAAACCTACC TATCCATGGA TCCCTCACTG
GTCGGTATGA GGGAGACTAT TCTAATAGGC CCATACACGG GTAGGTCTGG GATTGCGCAT
GTGCTTAAGG GTATTGGGGT TAATGCCGGT AAGAATGATG AGACCGTGGA GAGGGTTTAT
AGGGCAGTAG TTAGGCTTTA CGACGAGGGC CGTTTAAGGG AACCAATGAG TGAGGAGGAG
TTCATTAAGT CAATGAGTGG GTTAATTAAT GGGGAATCAG TGAAGTTTAA TGAGACTTAA
 
Protein sequence
MPPRLIFDGI SVEPNTPSEL YITDTTFRDG QQAFYAYSPS DVKGLFKLLS ELDNGSGRLS 
RSEFFLYTER DRRIVNAVKG LGLKYPKVIG WGRARVEDVR LVKESGLDEM VMLMSISDIH
IKAKFNTTRA RVVEKYLEAA EEAMRSGIAL RCSLEDVTRA DVLGFVVPFV NKLLRLRDKY
GASLVIKLPD TTGVGVPYPT ASLPYSIPKL IWVMRSLLKI PSNALEFHGH GDYHMAVANA
VAAWVYGAGI NNGTLLGIGE RAGNVPIEAL VVWYSRLKGS FDGMEPRVIS RIVEYFKGMG
YSVPRHQPIV GSNAYATAAG IHIDAQSKDP ETYLSMDPSL VGMRETILIG PYTGRSGIAH
VLKGIGVNAG KNDETVERVY RAVVRLYDEG RLREPMSEEE FIKSMSGLIN GESVKFNET