Gene Cmaq_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1916 
Symbol 
ID5709298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1992749 
End bp1994287 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content45% 
IMG OID641276424 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_001541723 
Protein GI159042471 
COG category[S] Function unknown 
COG ID[COG1892] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR02751] phosphoenolpyruvate carboxylase, archaeal type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATTA TACCGAGGAC AATGTGTACG CAGCACCCTG ACTACGCCAA TGTGCCTCAA 
TGGGTTGTTA ACGACTTCAT TAAGGGTGAT GATGAGGTTT ATGAAGCCTA CATGAATTAC
AGTATTTACG ATTGTCAGGA AACCATGTGG GACTTCGAGG GTAAGGACGT GGATATTTAC
GTGGTTAGGA AGCTCCTTGA GAATTACGGG GGATTCTTCA TTAATAAGGT GCTTGGGGAG
GATATTTACC TAACCTACAG GTTACCTAAC CCTAATGTTG AGGCCTCTGA TAGGAAGATT
TTCGCTGAGG CCCTTGAAAC AATACCAATG GCCTATGATT TAGCCAGGGT CTTCTACGGT
AAGCCAGTTA AGGCAATATT TGAAGTCATC TTCCCATTAA CCTCCAGTTC AAGGGACTTA
ATAATGACGC TGAGGTACTA TGAAAGGATT GTAGCAGGTA AATGCAGTGT TGAGCTTGAT
GATGGGCTTA AGGTCAGTGA CGTTATTGGG GAGGTTGAGC CGAAGACCAT TGAGGTGATC
CCACTGGTTG AGGATATGGA ATCACTAGTG AGGATTGACT CAATAATAGA GGGTTACGTT
AAGGTGGCTA AGCCCCAGTA CCTTAGGGTA TTCATAGCCA GATCCGACCC AGCAATGAAC
TATGGCCTAA TCCCAGCTGT TCTACTGGCT AAGATAGCCT TATCAAGGGT GTACGCAATT
GGTAACTCAT TGGGTTTAAG CATATACCCA ATAATAGGCG TTGGCCCAAC CCCCTTCAGA
GGTAATTTCA ACCCACGTAA CGTCAATAAC ACGCTCAAGG AGTACCCGGG GGTGTACACG
TTCACTGTTC AATCAGCCTT CAGGTACGAT TACCCGGTGG ATAATGCTAA GGATGCTATT
AACCTCATTA ATAATTCAAA ACCCACTGAA CCAGTGATAT TGAGTAGTGA TGAGGAGGAA
TTAGCCTTAA CCATAATTAG GCAGTACACT GATAGGTATC AGGCTGAGGT TGAGGGATTA
GCAAACGCAG TAAACTACAT TGCCCAACTC CTACCTCCAA GGAGAACTAG GAGGCTGCAC
ATTGGGTTAT TCGGTTACGG GAGGGGTTTC AGGGGGGTTA CGTTACCTAG GGCGATAGCC
TTCGTTGGAG CCTTATACTC AATAGGCATA CCCCCTGAGA TCCTAGGTCT CTCAACATTA
CTTAAGCTTA ATGAGAGACA GTGGGGTGTA TTGGAGGGGA ATTACGTTAA CCTATGGAGT
GACTTAAGCG ACGCTGCACA ATACATATGC ATGGAGTGTA TCGAGCAGTT ACCAAGTATG
AAGAGTGAAT TGAGGGTTAG TAAGGAGACT ATTGCAATGG TTCTTGAGGA TATTAAGGCA
ATTGATGAAT TAGGGGTTAA GGTGTCGTCA CCAGGCTTTG AACAGAGGAA GCATGCACTA
CTCACTAAGC TATTCCTTGA AAGCGTCAAT AACAGTTACA TTAATGATGC TAAGGCGTAT
CTACTGGATA TGGCTAAGGT CAGGAGGGCT ATTGGGTGA
 
Protein sequence
MRIIPRTMCT QHPDYANVPQ WVVNDFIKGD DEVYEAYMNY SIYDCQETMW DFEGKDVDIY 
VVRKLLENYG GFFINKVLGE DIYLTYRLPN PNVEASDRKI FAEALETIPM AYDLARVFYG
KPVKAIFEVI FPLTSSSRDL IMTLRYYERI VAGKCSVELD DGLKVSDVIG EVEPKTIEVI
PLVEDMESLV RIDSIIEGYV KVAKPQYLRV FIARSDPAMN YGLIPAVLLA KIALSRVYAI
GNSLGLSIYP IIGVGPTPFR GNFNPRNVNN TLKEYPGVYT FTVQSAFRYD YPVDNAKDAI
NLINNSKPTE PVILSSDEEE LALTIIRQYT DRYQAEVEGL ANAVNYIAQL LPPRRTRRLH
IGLFGYGRGF RGVTLPRAIA FVGALYSIGI PPEILGLSTL LKLNERQWGV LEGNYVNLWS
DLSDAAQYIC MECIEQLPSM KSELRVSKET IAMVLEDIKA IDELGVKVSS PGFEQRKHAL
LTKLFLESVN NSYINDAKAY LLDMAKVRRA IG