Gene Cmaq_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1915 
Symbol 
ID5709297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1991984 
End bp1992688 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content47% 
IMG OID641276423 
Producthypothetical protein 
Protein accessionYP_001541722 
Protein GI159042470 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCTG TACTATACTT CCTACTTGAG GCAGCCGTGG TGTATGTGTT GGTGGCTGTG 
ATAATGTACG TGTCATGGAG AATGGGGGGT GATGATGTGT TATTGGCTTC AGCAATATCA
TCATACCTAA TGCTCCTAAC CGTTAGTCAG TTCCTAGCCA GTAAAATAAT GTACATTGGC
TACGCCAACC TACCCAGCGG CACAGTAACC TACTCAGCCA CTGTGGCCAC ATTAGATGTA
TTAACCCTTA AATTCGGTAG GAGAACCGGT TACTGGGTTG TTAGGATTGC TGCACTGCTT
CAACTCGGGC TTTGGGCAAT CATTCAACTA GCAATATACG CCCCACCAGC CCCCTTCTGG
AGCATGCAGA ACGCCTTCGC AAGTATTGTT GGTGAATCAG CTAGAATAGC CGTAGCTAGT
GTTACAGCGT TCTTCACCGC TGAATCCCTT GACGTTCATC TGGTGAGTAG GATTATGGGT
AATGTGTTCA AGAGGGTTGG TGTATCAGAC CCAATCAGTA TGACTGTGGA TAGTTTAGTC
TTTGTACCGA TAGCCTTCTA CGGTGTAATG CCGTTACCAG CATTATTAAG CACCATGCTA
GGCTTAATAC TGGGTAAATT AACCCTAGTA CCCTTAACCA TAGGCGCCGT GGCCGCTAAT
AGAAGTGCAT TAAAGTACGC CCCGGTGATT CAAGTCCGTA AGTAA
 
Protein sequence
MYPVLYFLLE AAVVYVLVAV IMYVSWRMGG DDVLLASAIS SYLMLLTVSQ FLASKIMYIG 
YANLPSGTVT YSATVATLDV LTLKFGRRTG YWVVRIAALL QLGLWAIIQL AIYAPPAPFW
SMQNAFASIV GESARIAVAS VTAFFTAESL DVHLVSRIMG NVFKRVGVSD PISMTVDSLV
FVPIAFYGVM PLPALLSTML GLILGKLTLV PLTIGAVAAN RSALKYAPVI QVRK