Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1900 |
Symbol | |
ID | 5708536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1978085 |
End bp | 1979233 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641276408 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001541707 |
Protein GI | 159042455 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.816144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGG ATTATTCCCA AAGACCACTC CTAGTCTTCT GGGAGACCAC TAAGGCATGC CCATTAAGCT GCAGGCACTG TAGGGCTAAT GCAATATTAA AGCCACTACC CGGTGAATTA AGCACGGATG AGGGTAAGAG GCTTATTGAG CAATTACCTG AATTCGGTAA ACCAACCCCA GTATTAATAT TGACTGGTGG TGACCCATTA ATGAGGGAGG ACATATTTGA GTTAATTGAC TACGCTAAAT CATTGAATGT ACCGGTAGCT GTATCACCAA CGGTTTCTGA GAAGTTGCTT AGTGATAATG TTATTGATGA GTTGAGGAGG GTGAGTTCAG TTTCAGTGAG TCTTGATGGT GCGTCACCGA CTACTCATGA GTACATTAGG AATAGGAATG GTGTATTTGA GTTAACGTTA AAGGCAATAT CAAGTCTCCT TAAGGCTGGG GTTAAGGTTC AAGTTAACAC AACGTTCATG AAGCTTAACG TGCATGAATT ACCGTTAATA GTTAAGGTGC TTAAGGACCT AGGAGTCTAC ACCTGGGAGG TGTTCTTCCT AATACACGTG GGTAGGGGTA TTGAGCTTGA GGCATTAACA CCAGAGGAGA CTGAGGATGT GGTTAATGTA CTCTACGATG TATCTAAGTA CGGCTTCACA GTGAGGACTG TTGAGGCCCC ATTTTATAGG AGAGTTGTAC TGCATAGGTA CGCCTTTGAG AATAATGAAA TTAACATAAA GCCAAACCTT GGTCCATTAT ACAGGCAATT ATATGAGGGT TTGATTAAAG TCATGGGGAA TGAACCACCT AAACTCACTA AGAGACCTAT GGTTGCTAGG ACTAGGGATG GGGATGGGAT AATATTCGTA GCCTACAATG GTGACGTATC ACCAAGCGGT TTCCTACCAA TTAAACTGGG TAATGTTAAG GAGGAGAGCT TGGTTAAGAT ATATAGAGAG AACCCAGTAC TGTTGAGGAT AAGGAGGGGG GAGTATGGTG GTAGGTGTGG TTTATGCGAG TTCCGCTTCA TATGCGGGGG CTCTAGGGCT AGGGCCTACG CTGAGTATGG GGATCCATTA GCCGAGGACC CAGCGTGCGT TTACAGTCCT GGTACCATTA GGCTTCCTGA ATCAACACTA AGCCCTTAA
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Protein sequence | MPLDYSQRPL LVFWETTKAC PLSCRHCRAN AILKPLPGEL STDEGKRLIE QLPEFGKPTP VLILTGGDPL MREDIFELID YAKSLNVPVA VSPTVSEKLL SDNVIDELRR VSSVSVSLDG ASPTTHEYIR NRNGVFELTL KAISSLLKAG VKVQVNTTFM KLNVHELPLI VKVLKDLGVY TWEVFFLIHV GRGIELEALT PEETEDVVNV LYDVSKYGFT VRTVEAPFYR RVVLHRYAFE NNEINIKPNL GPLYRQLYEG LIKVMGNEPP KLTKRPMVAR TRDGDGIIFV AYNGDVSPSG FLPIKLGNVK EESLVKIYRE NPVLLRIRRG EYGGRCGLCE FRFICGGSRA RAYAEYGDPL AEDPACVYSP GTIRLPESTL SP
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