Gene Cmaq_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1900 
Symbol 
ID5708536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1978085 
End bp1979233 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content44% 
IMG OID641276408 
Productradical SAM domain-containing protein 
Protein accessionYP_001541707 
Protein GI159042455 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.816144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTGG ATTATTCCCA AAGACCACTC CTAGTCTTCT GGGAGACCAC TAAGGCATGC 
CCATTAAGCT GCAGGCACTG TAGGGCTAAT GCAATATTAA AGCCACTACC CGGTGAATTA
AGCACGGATG AGGGTAAGAG GCTTATTGAG CAATTACCTG AATTCGGTAA ACCAACCCCA
GTATTAATAT TGACTGGTGG TGACCCATTA ATGAGGGAGG ACATATTTGA GTTAATTGAC
TACGCTAAAT CATTGAATGT ACCGGTAGCT GTATCACCAA CGGTTTCTGA GAAGTTGCTT
AGTGATAATG TTATTGATGA GTTGAGGAGG GTGAGTTCAG TTTCAGTGAG TCTTGATGGT
GCGTCACCGA CTACTCATGA GTACATTAGG AATAGGAATG GTGTATTTGA GTTAACGTTA
AAGGCAATAT CAAGTCTCCT TAAGGCTGGG GTTAAGGTTC AAGTTAACAC AACGTTCATG
AAGCTTAACG TGCATGAATT ACCGTTAATA GTTAAGGTGC TTAAGGACCT AGGAGTCTAC
ACCTGGGAGG TGTTCTTCCT AATACACGTG GGTAGGGGTA TTGAGCTTGA GGCATTAACA
CCAGAGGAGA CTGAGGATGT GGTTAATGTA CTCTACGATG TATCTAAGTA CGGCTTCACA
GTGAGGACTG TTGAGGCCCC ATTTTATAGG AGAGTTGTAC TGCATAGGTA CGCCTTTGAG
AATAATGAAA TTAACATAAA GCCAAACCTT GGTCCATTAT ACAGGCAATT ATATGAGGGT
TTGATTAAAG TCATGGGGAA TGAACCACCT AAACTCACTA AGAGACCTAT GGTTGCTAGG
ACTAGGGATG GGGATGGGAT AATATTCGTA GCCTACAATG GTGACGTATC ACCAAGCGGT
TTCCTACCAA TTAAACTGGG TAATGTTAAG GAGGAGAGCT TGGTTAAGAT ATATAGAGAG
AACCCAGTAC TGTTGAGGAT AAGGAGGGGG GAGTATGGTG GTAGGTGTGG TTTATGCGAG
TTCCGCTTCA TATGCGGGGG CTCTAGGGCT AGGGCCTACG CTGAGTATGG GGATCCATTA
GCCGAGGACC CAGCGTGCGT TTACAGTCCT GGTACCATTA GGCTTCCTGA ATCAACACTA
AGCCCTTAA
 
Protein sequence
MPLDYSQRPL LVFWETTKAC PLSCRHCRAN AILKPLPGEL STDEGKRLIE QLPEFGKPTP 
VLILTGGDPL MREDIFELID YAKSLNVPVA VSPTVSEKLL SDNVIDELRR VSSVSVSLDG
ASPTTHEYIR NRNGVFELTL KAISSLLKAG VKVQVNTTFM KLNVHELPLI VKVLKDLGVY
TWEVFFLIHV GRGIELEALT PEETEDVVNV LYDVSKYGFT VRTVEAPFYR RVVLHRYAFE
NNEINIKPNL GPLYRQLYEG LIKVMGNEPP KLTKRPMVAR TRDGDGIIFV AYNGDVSPSG
FLPIKLGNVK EESLVKIYRE NPVLLRIRRG EYGGRCGLCE FRFICGGSRA RAYAEYGDPL
AEDPACVYSP GTIRLPESTL SP