Gene Cmaq_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1896 
Symbol 
ID5709979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1972831 
End bp1973574 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content45% 
IMG OID641276404 
Producthypothetical protein 
Protein accessionYP_001541703 
Protein GI159042451 
COG category[R] General function prediction only 
COG ID[COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.334422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGG GCTTGGATTA CGTTAATGAG TATAAGGCTA CCGTGGTGAG GTTAATTGAC 
GATGTTTTAA AGGACCAGTG GAGTAACATT AAGTCAGCCG CGGACCTATG CGTCGATTCA
TTAAGTAAGG GTGGGTTAAT TTACGTCTTC GGTACCGGTC ACTCAATGTT AATGGTGCTT
GAGGTATTCT ATAGGTCAGG GGGATTAGCG TCAATTTACC CGATACTTGA CCCGAATCTA
CTTGGGTTAA ACGGCATGTC CCTCTCAAGT AGCCTTGAGA GGCTACCCGG CTACGCAAGT
AATCTCCTTA ATTCACAGAG AATAGTACCA AACTCAGTAA TGATCATAGT GTCTAATTCA
GGTAAAAATG CCGCACCCGT GGAAATGGCC TACGAGGCTA AGAGGAGGGG GTTAAGGGTT
ATTGCATTAA CGTCAATCAA CTACTCAAGG AGTCTTCAAC CAGATAACCC ACTTGGTAAG
AGACTTTTCG AGCTGGCTGA CGTCACCATT GATAATAAGG TACCGCCAGG GGAGGCTGCA
TTGGAGATTG AGGGCACTAG GGTTGCCGCA GTATCAACTA TAGTAAACGC ATTTATACTA
CATAGCCTTG AATTAACGAT AATGAGTGAA TTAAGGAGGA GGGGTATTGA ACCCGAGGTC
TGGGTTAGCG TTAACGTACC AGGTGGTAGG GAGCGTAATG AATCCTTATT AAGCAAGTAT
AGGCAGATCG TGAGGTATTT GTAG
 
Protein sequence
MSGGLDYVNE YKATVVRLID DVLKDQWSNI KSAADLCVDS LSKGGLIYVF GTGHSMLMVL 
EVFYRSGGLA SIYPILDPNL LGLNGMSLSS SLERLPGYAS NLLNSQRIVP NSVMIIVSNS
GKNAAPVEMA YEAKRRGLRV IALTSINYSR SLQPDNPLGK RLFELADVTI DNKVPPGEAA
LEIEGTRVAA VSTIVNAFIL HSLELTIMSE LRRRGIEPEV WVSVNVPGGR ERNESLLSKY
RQIVRYL