Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1892 |
Symbol | |
ID | 5710238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1969013 |
End bp | 1969570 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641276400 |
Product | 50S ribosomal protein L15e |
Protein accession | YP_001541699 |
Protein GI | 159042447 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1632] Ribosomal protein L15E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.551367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACGT TACGCTATGT TGCTGATATT TGGAAGAAAC CGTATGAGGA TCCGTTGAGG CAGGTGATTA AGGCTAGGTT AATTAAGTGG CGTAGGGAAC CTGCAATACT TAGGGTTGAT AAACCAACAA GGATTGATAA GGCTAGGAAG TACGGGTATA AGGCTAAGCA GGGTGTGGTG GTGGTGAGGG TTAGGGTGAG GAGGGGTCCA TTTAATAGGC GTAGGCCTAA TACTGGTAGG AGACCTAAGA GAATGGGGGT TTATGGTGTT GCATTATCCA CTAACCTACA GGTGGTTGCC GAGCAGAGGG CGGCTAGGAG GTTCAGTAAC CTGGAGGTTC TTGGGTCATA CTGGGTTGGT GAGGATGCCA TGTATAAGTG GTTTGAGGTT GTTATGATTG ATCCAAGTCA CCCAGCAATT AGGAATGACC CAGATTACGC CTGGGTGGTT GGTAAGGAGT ATAGGGAGGG TAGAAGGATT AGGAGGATTA GGGAGAGGCA GAGGAAGCTA ATTGAGAGGT TGAGGAAACA AGCCAGTGGG GGTTCAAGTC AACAGTAA
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Protein sequence | MGTLRYVADI WKKPYEDPLR QVIKARLIKW RREPAILRVD KPTRIDKARK YGYKAKQGVV VVRVRVRRGP FNRRRPNTGR RPKRMGVYGV ALSTNLQVVA EQRAARRFSN LEVLGSYWVG EDAMYKWFEV VMIDPSHPAI RNDPDYAWVV GKEYREGRRI RRIRERQRKL IERLRKQASG GSSQQ
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