Gene Cmaq_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1892 
Symbol 
ID5710238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1969013 
End bp1969570 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content48% 
IMG OID641276400 
Product50S ribosomal protein L15e 
Protein accessionYP_001541699 
Protein GI159042447 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1632] Ribosomal protein L15E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.551367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACGT TACGCTATGT TGCTGATATT TGGAAGAAAC CGTATGAGGA TCCGTTGAGG 
CAGGTGATTA AGGCTAGGTT AATTAAGTGG CGTAGGGAAC CTGCAATACT TAGGGTTGAT
AAACCAACAA GGATTGATAA GGCTAGGAAG TACGGGTATA AGGCTAAGCA GGGTGTGGTG
GTGGTGAGGG TTAGGGTGAG GAGGGGTCCA TTTAATAGGC GTAGGCCTAA TACTGGTAGG
AGACCTAAGA GAATGGGGGT TTATGGTGTT GCATTATCCA CTAACCTACA GGTGGTTGCC
GAGCAGAGGG CGGCTAGGAG GTTCAGTAAC CTGGAGGTTC TTGGGTCATA CTGGGTTGGT
GAGGATGCCA TGTATAAGTG GTTTGAGGTT GTTATGATTG ATCCAAGTCA CCCAGCAATT
AGGAATGACC CAGATTACGC CTGGGTGGTT GGTAAGGAGT ATAGGGAGGG TAGAAGGATT
AGGAGGATTA GGGAGAGGCA GAGGAAGCTA ATTGAGAGGT TGAGGAAACA AGCCAGTGGG
GGTTCAAGTC AACAGTAA
 
Protein sequence
MGTLRYVADI WKKPYEDPLR QVIKARLIKW RREPAILRVD KPTRIDKARK YGYKAKQGVV 
VVRVRVRRGP FNRRRPNTGR RPKRMGVYGV ALSTNLQVVA EQRAARRFSN LEVLGSYWVG
EDAMYKWFEV VMIDPSHPAI RNDPDYAWVV GKEYREGRRI RRIRERQRKL IERLRKQASG
GSSQQ