| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1890 |
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| Symbol | |
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| ID | 5710236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1964935 |
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| End bp | 1965900 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641276398 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001541697 |
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| Protein GI | 159042445 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.026999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.56127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTTGT TGAGTATTAG GAATCTGAAC GTGGAGTATA GGTTACCTGA CTTGAAGATT
GCCGTTAAGG CCCTTAAGGG GGTTAACATT GATGTTAATA AGGGTGATAT TGTTGGAGTT
GTTGGGGAGA GTGGTTCAGG TAAGTCAACA CTTGCCTTAG CTATAATGCG CATGCTTAAG
CCGCCGGCCA TAATTAGGAG CGGCAGCATT TACTTTAATG GCGTTGATTT ACTGGCGCTT
AGTGAACATG AGTTTAACTC TAAGTATAGG TGGGTTAAGG TGTCGATGGT TCCTCAAGCA
AGCCAAAACA TATTTAACCC AACCATGAGG ATTAAGGATC ATTTCCTTGA TACCGCTAAG
GCACATGGCA TAACTAATGA GAACGAGGTA CTGAAGAAGG CTAGTGAAAT GCTTGAATTC
ACTAAACTTA ATCCAGCCAG GGTCTTTAAC CTATATCCAC ATCAATTATC AGGAGGTATG
AAGCAGAGGG TTGCCATATC CCTGGCATTA TTCCTAAACC CAGAGTTGGT TATTATGGAT
GAACCCACGG CTGCCTTAGA TGTGGTTACT CAAATGGATA TCCTTAACCT AGTTAAGTCA
ATTAACGAGA AGTTAGGCAC AACAATAATC TTCATTACAC ATGACATATC TATAATACCT
GTAATAGCTT CATCAGTGGT TGTGCTATAT AATGGTGAAG TCATGGAGGT GGGGCCAATG
GAGGATATTA TAATTGATCC AAAGCACCCG TACACTAAGG CCCTGGTTCA ATCAACACCA
TCATTATCCT CAAGCGCTGA TGAGGTTAAG CCAATACCAG GTGAGCCTCC TAATCCACTT
GAGGATATTC AAGGTTGCCC ATTCTGGCCC CGTTGCCCAT ACGTAATGGA TGTGTGTAAA
ACTGATAAAC CCGGTGAGTA TAATGTTAAT GGAAGAATAG TGAGGTGTTA CCTGTATGAG
AAGTAA
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| Protein sequence | MPLLSIRNLN VEYRLPDLKI AVKALKGVNI DVNKGDIVGV VGESGSGKST LALAIMRMLK
PPAIIRSGSI YFNGVDLLAL SEHEFNSKYR WVKVSMVPQA SQNIFNPTMR IKDHFLDTAK
AHGITNENEV LKKASEMLEF TKLNPARVFN LYPHQLSGGM KQRVAISLAL FLNPELVIMD
EPTAALDVVT QMDILNLVKS INEKLGTTII FITHDISIIP VIASSVVVLY NGEVMEVGPM
EDIIIDPKHP YTKALVQSTP SLSSSADEVK PIPGEPPNPL EDIQGCPFWP RCPYVMDVCK
TDKPGEYNVN GRIVRCYLYE K
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