| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1882 |
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| Symbol | |
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| ID | 5709376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1957704 |
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| End bp | 1960121 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641276390 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001541689 |
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| Protein GI | 159042437 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0300452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0368515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTC GCTTAATAAT AGATTCAGTG GAGTTGGAGG GATTTAGGGT ATTTAAGAGT
AGGGTTGTCT TTAACTTCAT TGATGGCTTA AACGTGATTC ATGGACCAAT AGGTTCAGGT
AAATCAAGTA TAATTCAAGC CATTGAATTC GCCCTTTACG GTAATCAATT GGAGGCTAGG
GAGAGGGTTG CTAGGTTAAG TGACTTGATT AATGAGGATT CTAATGAGGC CACGGTAGCC
TTAAGACTAA GCGGTAACCT AATATTGAGG AGGTTAATGC GTAAGGGTAA TTCAACATAC
CAGGCCTTAA CGCTAAACGG TAACCAATCA ACTGACGACC AGTTAGTTAC GCTACTGGGG
GTTGATGATG ATGACTTTGA GAGATTCATC CTAATTAGCC ACAAGACCCT TGAGGACTTA
GTTTATGGTT CAGTTAGGAG GAGGACATTA GCCATAGATA GGCTCTTTGG ATTGGAGTTC
CTTGAGATCC TAGGTAGTGT ACTACCGGTT AAGCAGGTTA ATGAGGCTAT AGATATTAGG
AAGCAGAGGT TAGCCAGTAT AAGGGAGGCT GAGGATCTTC TACGTAAGTA TGGTTCAATT
AAGGCAGCCT TAGATAAGAG GAGTAGCCTA GCCGCTGAGA TAGAGAGTAT TAGGGAGCAG
GTTAAGGCTA TTTCATCAGC CTACGTTGAG TTAGCTAATA GGAGGTCAAG GTACGTTGAG
GCAATTAAGA GGGTTGAGGA ACAGTACACA AGGTACCTTT ACGTTAGGGA ACGGTTAAGG
CAGCTTGAGG AGGAGTTGAG GAGTATTAAG GATGAGGATT ACGGTGAGGT CTTAATTAAG
GGTAGTCTAG AGGTCATTAG ACGCATGTTG ATTCCAAGAC TTGAATCAGC CATGCTTCAG
GAATTAAGTG AAAGACTTGA GAAGGCTAAT ACCATTGATG AACTACTTGA ATTAAGCTAC
AGTGGTATCA ATGCCCTGGA GGGTAAGGTG AAGGAGCTTG AGGAGGAGTT AGAGGCCATG
AGGAGGAGTA GGGAGGATTT AAGCAGGTTA ATAGATAGGA CTAGGGGGGA GTTGAATTCT
ATAATGGAGA GGATTAACGC CATTGAGGAG GCTGCTAAGC AGTATGCAGA GTACGTTAGG
AAGTACGGGG ATTTAAGTAA GGTTAAGGCT GATTTAGAGT CCGCTAGGAG TGAGTATAAT
GAAATTGAGA CTGTGGTTAA GGTTAAGGCA TCCGCATTGG AGGTGCTTAA CTACTTGATA
AGGGAGCTTG AAATACACGG TGAGGCAACA TGCCCAGTCC ATGGTTTTAA AGTAACGAGG
GATAGGCTTA ATGAACTTAA GGAGAGGGCC AGTAATCTGC AGAGGGAGTT AAGTGAGTTA
AGGATTATTG ATGTTAAGAA TAGGGTTAAT GAACTTGAGA GGGTTGTTAT GGAGATGGAG
GGTTTATATA CGCAGTATGT TCAATACCAG GAATTACTAA GTAAGGTTAA TGATTATAAG
ACTCAATTAA ACCAATACAT CGATAAGCTT CAAAGACTGG AGAGGGCTAT TGCTGATCTT
GAGAAGAGGA TTAAGGACTT CAGGGGCATT ATTGAGTTAA CCCACAGGAG ACTTGAGGAG
ACTGAGAAGA GGTACTTAAT CCTCAGGAAG ATTAAGGAGA GGGATTCATT AAGGCTTGAG
GAGAGTAACC TACTCAGTGA GCTTAAGGGA AGCGGCATAA ACCTAGATGA GATCGTGGGT
ATTGATGAAG CCTTGAGGGA TATGGAGAAG CGCATGGATG AACTCAGGAG GAGGCTTGAG
GAAGCTACAT CAGAATACAT GCAATTAGAC ACTGTGCTAT CTAGGATAAG TCACGAAAAC
ATTGATGTCG AGAAAACCCT CAGCGAAATA AAGGAACTTG AGGAGATTAA TGGTAAATTC
CAGCGCATAC TTAATAAGCT TAATGAAGTT CAGAATAAGG TTAGGGGTGA CGTGGTTAAT
ATAATTCAAT CCAAGGTGGT TGACTTATTC AAGCAATTAT ACCCATACAG TGACTTGGAG
GGGATAACCG TTAAGCTTCA GCATAGGAGG GGTAAGGGAA GTGACTACGT GCTTTATGCA
CTTAGGGGAG GTAGGGATGT TCCAGTATCT AGGCTTAGTG ATGGGCAAAG ATTAACCCTA
GCTCAATCAT TCGTACTAGC GGTATATAGG CTAATGCAGC ATAACTTAGG CTTCATACTA
ATGGATGAAC CAATCCCTTA CGTTGACGCT AATGCTAAGA GAACATTCTC TGAAACCATT
GTAAGGGCGA TAAGCGAGGG TATGATTAAT CAAGTCATAT TGGCAACTCA GGATGATGCA
TTATTAGAGG CTTTAATTAA AAGCTCTGAG GGGGGTAAAG TGAGGAGTAA TGTAATTAGG
CTTCAACACC CCAGGTGA
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| Protein sequence | MSSRLIIDSV ELEGFRVFKS RVVFNFIDGL NVIHGPIGSG KSSIIQAIEF ALYGNQLEAR
ERVARLSDLI NEDSNEATVA LRLSGNLILR RLMRKGNSTY QALTLNGNQS TDDQLVTLLG
VDDDDFERFI LISHKTLEDL VYGSVRRRTL AIDRLFGLEF LEILGSVLPV KQVNEAIDIR
KQRLASIREA EDLLRKYGSI KAALDKRSSL AAEIESIREQ VKAISSAYVE LANRRSRYVE
AIKRVEEQYT RYLYVRERLR QLEEELRSIK DEDYGEVLIK GSLEVIRRML IPRLESAMLQ
ELSERLEKAN TIDELLELSY SGINALEGKV KELEEELEAM RRSREDLSRL IDRTRGELNS
IMERINAIEE AAKQYAEYVR KYGDLSKVKA DLESARSEYN EIETVVKVKA SALEVLNYLI
RELEIHGEAT CPVHGFKVTR DRLNELKERA SNLQRELSEL RIIDVKNRVN ELERVVMEME
GLYTQYVQYQ ELLSKVNDYK TQLNQYIDKL QRLERAIADL EKRIKDFRGI IELTHRRLEE
TEKRYLILRK IKERDSLRLE ESNLLSELKG SGINLDEIVG IDEALRDMEK RMDELRRRLE
EATSEYMQLD TVLSRISHEN IDVEKTLSEI KELEEINGKF QRILNKLNEV QNKVRGDVVN
IIQSKVVDLF KQLYPYSDLE GITVKLQHRR GKGSDYVLYA LRGGRDVPVS RLSDGQRLTL
AQSFVLAVYR LMQHNLGFIL MDEPIPYVDA NAKRTFSETI VRAISEGMIN QVILATQDDA
LLEALIKSSE GGKVRSNVIR LQHPR
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