Gene Cmaq_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1880 
Symbol 
ID5709374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1957063 
End bp1957464 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID641276388 
Producthypothetical protein 
Protein accessionYP_001541687 
Protein GI159042435 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0346889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0669854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATA GGTTAATGGA TATTTTAGCA TGCCCATATG ATAAAACATT CCCACTAACC 
CTAGTGGTAT TTGAGGAGAA GACTTACCCT GAAAGAACAT ACAGCGGTAG AGTACCCTTC
TGCGAACTAT ACTGCTCCTT CAGGAAAATG AACATTAAGG ACATGAGTAA CCCAAGCCAG
GAAGCACCCT GCGGTGAGTG CATTAAGCAT GAGGTGGTTA ACGGCATACT ATACTGCCCA
ACCTGCGGTA GATGGTACCC CATAAAGGAT GAGATACCGA TACTACTCCC CGATGAGTTA
AGGAATAAGA AGGAGGATGA TGAATTCCTG GATAAGTTCA AGGATAAGAT AAGGGAATTA
GCCCCTGAGA TAGCATCCAA GATACTTAAA CAAGCCACGT AA
 
Protein sequence
MKYRLMDILA CPYDKTFPLT LVVFEEKTYP ERTYSGRVPF CELYCSFRKM NIKDMSNPSQ 
EAPCGECIKH EVVNGILYCP TCGRWYPIKD EIPILLPDEL RNKKEDDEFL DKFKDKIREL
APEIASKILK QAT