Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1880 |
Symbol | |
ID | 5709374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1957063 |
End bp | 1957464 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641276388 |
Product | hypothetical protein |
Protein accession | YP_001541687 |
Protein GI | 159042435 |
COG category | [S] Function unknown |
COG ID | [COG2835] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0346889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0669854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA GGTTAATGGA TATTTTAGCA TGCCCATATG ATAAAACATT CCCACTAACC CTAGTGGTAT TTGAGGAGAA GACTTACCCT GAAAGAACAT ACAGCGGTAG AGTACCCTTC TGCGAACTAT ACTGCTCCTT CAGGAAAATG AACATTAAGG ACATGAGTAA CCCAAGCCAG GAAGCACCCT GCGGTGAGTG CATTAAGCAT GAGGTGGTTA ACGGCATACT ATACTGCCCA ACCTGCGGTA GATGGTACCC CATAAAGGAT GAGATACCGA TACTACTCCC CGATGAGTTA AGGAATAAGA AGGAGGATGA TGAATTCCTG GATAAGTTCA AGGATAAGAT AAGGGAATTA GCCCCTGAGA TAGCATCCAA GATACTTAAA CAAGCCACGT AA
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Protein sequence | MKYRLMDILA CPYDKTFPLT LVVFEEKTYP ERTYSGRVPF CELYCSFRKM NIKDMSNPSQ EAPCGECIKH EVVNGILYCP TCGRWYPIKD EIPILLPDEL RNKKEDDEFL DKFKDKIREL APEIASKILK QAT
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