Gene Cmaq_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1872 
Symbol 
ID5709745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1946209 
End bp1946775 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content43% 
IMG OID641276380 
ProductATP:corrinoid adenosyltransferase BtuR/CobO/CobP 
Protein accessionYP_001541679 
Protein GI159042427 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2109] ATP:corrinoid adenosyltransferase 
TIGRFAM ID[TIGR00708] cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.207909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATA GTAGCTACCG CTTCATTAAA GCTTATGCCT TATATACCAC TGATTATTAT 
ACCCAGTCTA TGGGTTTAAT ACTAGTCTAC ACTGGTGATG GTAAGGGTAA GACCACTGCA
GCATTAGGCC TGGTGCTGAG GGCTTACGGC CATGGATTAA GGTCAATAGT TGCACACGTT
ATGAAGACCC TAATTTACAG AGGACAGTGG GTTGGTGAAT ACTCGGCATT ACTTAAGATG
AGTGATCTGG TTGAGGTGTA TTACATGAGT GAGGAAGCCT TAAGGACCCC TAGGGATGTT
TTCAACAAGG CTATTGAAAG GAGCATTATG ATTAAACCCT TCCTACTAGT ATTGGATGAG
GTTAACAATG CAGTTAACGG TGGGTTAATG ACTAGTCGTG AAGTTATTGA TGGCTTAAGG
AAGCTACCCA ATGAGGTTAA CGTCGTTTTA ACAGGCCGTA ATGCACCAAG TGAATTCCTT
GAGTTAGCCG ACCTAGTAAC TGAGTTTAAG CCTGTTAAGC ATTACTATGA TAAGGGTATT
GTGGGAGTCA TGGGCCTTGA GTGGTGA
 
Protein sequence
MRNSSYRFIK AYALYTTDYY TQSMGLILVY TGDGKGKTTA ALGLVLRAYG HGLRSIVAHV 
MKTLIYRGQW VGEYSALLKM SDLVEVYYMS EEALRTPRDV FNKAIERSIM IKPFLLVLDE
VNNAVNGGLM TSREVIDGLR KLPNEVNVVL TGRNAPSEFL ELADLVTEFK PVKHYYDKGI
VGVMGLEW