| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1869 |
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| Symbol | sdhA |
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| ID | 5709741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1942873 |
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| End bp | 1944669 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641276376 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001541676 |
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| Protein GI | 159042424 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.462567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.466053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGAT TTATAAAATC CAAGCTAATT ACTGAATGCA TGGTTGAAGT ATTGAAGTAC
GACATAGTGA TTCTTGGCTC TGGGTTAGCT GGCTTAAGGG CAGCCTTCGA GGCCGCTAGG
GTTAGTAATG GTAAGCTTAG GATAGCCGTC ATATCTAAGG TTCAAGCCAT GAGAAGCCAC
TCAGTCTCCG CGGAGGGTGG TGCGAGTGCG GTCCTGTATC CTAAGGATAA TGGGGATAAT
ATAGACCTAC ATGCCTACGA TACCGTTAAG GGCAGTGACT TCCTGGCTGA TCAAGATGCG
GTTGAGGTTT TAGTTAGGGA GGCTCCTAAG GAAATAATCT TCATGGATCA TTTAGGCGTC
CCATGGTCTA GGGATGCTCA GGGTAGGATT CTTCAAAGAC CCTTCGGTGG AATGACTATA
CCGAGGACAA CCTTCGCCCA GGATAAGAGT GGTTTCTTCC TATTAAGTAC TCTATATGAT
AATACGCTTA GGTTTAAGAA CGTTGAGATG TTTCATGAGC ACTTTGCCAC ATCAATGATT
ATGCAGAATG GGGTCTTCAA GGGGTTCACG GTAATTGACC TTAAGACTGG GGAATTTAAG
GTGTTCCTCG CTAAGGTAGG TATAATAGCC ACGGGTGGTA ATGGTAGGGT GTACGGCTTC
ACCACAATGG CTCACTCATC CACGGGGGAT GGGTATTCAC TAGCCTATAG GGCTGGGATA
CCGCTTAAGG ACTTTGAATT CCCTCAATTC CACCCAACTG CCCTAGTCCC GAACGGTATA
CTGATAACTG AGGGGGCTAG GGGTGAGGGT GGTTACTTGA TTAATAAGGA GGGGGAGAGG
TTTATGAAGA GGTATGCACC AAGTAGGATG GAGTTGGCTC CAAGGGACAT AGTTAGTAGG
GCCATAGTGA CGGAGTGCAT GGAGGGTAGG GGTTTCATTG ATGAGGAAAC AGGCCTATGC
TACGTGTTGC TTGATTTAAG GCACTTGGGT GAGGAGAGAA TTGAAAGTAG GTTACCTATG
ATTAGGGAAA TAGCCATGAA GACTCTTGGA ATCGATCCAG TAAATGAACC TATTCCAGTT
AGACCAGCAA TGCACTACAT GATGGGTGGA ATACACGCTG ATATTAATGG GCAAGTAATG
CTTGATGAAA CAACAACAAG GGTACCTAAC CTTTGGACAG CAGGTGAGGC AGCATCTATA
AGTGTTCATG GTGCTAATAG GCTAGGCAGT AACTCACTAT CAGAATGCTT AGTCTGGGGT
AGGATAACTG GAGCATTAGC AGCACAGTAT GCCCTTAATG CATCTGAACC GGAGTTCGAT
GGATCAATCA AGGACCTGGC ATCTAGGGAG GAGAGTAGGA TATTCGATAA GTTAATTCAT
AAGGAGGTTG GGGGTGAGAA TCCATATGAA ATTAAGGCTG AGATGAATTC AACAATGGAT
AATAACGTTT ACGTGTTTAG AGATAAAAGC ACCCTTGAGG AGGCTTACAC AAGCATTAAG
AGGCTTAGGG AGAGGTTTAC TAAGGTTAGG CTTGAGGATG ACGGCAGGAT ATATAACCAG
AACCTTAAAG ACATCCTGGA ATTAGACTTC CTACTTGAGC AAGCCGAGTT AATAACGATA
GCTGCATTAA ATAGGACTGA GTCAAGGGGT GCACACTATA GGTTAGATTA CCCCAAGAGG
GATGATGCCA ATTGGCTTAA GCACACTCTA CTCTTCTACA CGGCAGGAGA TAAGCCTAGA
ATAAGTTACT CACCGGTTAA GATAACTCGT TGGAAACCTG AGGAGAGGAA GTATTAG
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| Protein sequence | MIRFIKSKLI TECMVEVLKY DIVILGSGLA GLRAAFEAAR VSNGKLRIAV ISKVQAMRSH
SVSAEGGASA VLYPKDNGDN IDLHAYDTVK GSDFLADQDA VEVLVREAPK EIIFMDHLGV
PWSRDAQGRI LQRPFGGMTI PRTTFAQDKS GFFLLSTLYD NTLRFKNVEM FHEHFATSMI
MQNGVFKGFT VIDLKTGEFK VFLAKVGIIA TGGNGRVYGF TTMAHSSTGD GYSLAYRAGI
PLKDFEFPQF HPTALVPNGI LITEGARGEG GYLINKEGER FMKRYAPSRM ELAPRDIVSR
AIVTECMEGR GFIDEETGLC YVLLDLRHLG EERIESRLPM IREIAMKTLG IDPVNEPIPV
RPAMHYMMGG IHADINGQVM LDETTTRVPN LWTAGEAASI SVHGANRLGS NSLSECLVWG
RITGALAAQY ALNASEPEFD GSIKDLASRE ESRIFDKLIH KEVGGENPYE IKAEMNSTMD
NNVYVFRDKS TLEEAYTSIK RLRERFTKVR LEDDGRIYNQ NLKDILELDF LLEQAELITI
AALNRTESRG AHYRLDYPKR DDANWLKHTL LFYTAGDKPR ISYSPVKITR WKPEERKY
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