Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1865 |
Symbol | |
ID | 5709665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1940449 |
End bp | 1940877 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641276372 |
Product | hypothetical protein |
Protein accession | YP_001541672 |
Protein GI | 159042420 |
COG category | [S] Function unknown |
COG ID | [COG1786] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000298888 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.822078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCAGG TGCGTGCGCT TAAGGGTAAT ACCGTCCACG GTAATGGTGT TGTATCAGGG GAGTTAATTG CCATTAATAC ACCAATATCA TTCCTAGGTG ATGTTGATGG TGCCAGGGGT ATTGTTAAGG TTAAGGGGAT GGAAATCAAT ATAGCTGGTA AGATCCTTGC ATTACCATAC TCCACCGGTT CAACGGTGGG TCCATACGTA ATGTATAAGT TAGCTAAGTA CGGTAAGGCG CCATTAGCCA TACTCACCAT TAAGCCTGAC ACATTAGTAC TGGTTGGGTC AATTATGGCT AACATACCCT TAGTAATTAA TATTCCTGAG GAAATACTTA ACTACAGTGG ATGCGTAATT GAGGTGAACC TAAATGAGTC AACAGTACTC ATCCCAGATG AGTGCAAGGT TAGCAATGCT ACTGCTTAG
|
Protein sequence | MRQVRALKGN TVHGNGVVSG ELIAINTPIS FLGDVDGARG IVKVKGMEIN IAGKILALPY STGSTVGPYV MYKLAKYGKA PLAILTIKPD TLVLVGSIMA NIPLVINIPE EILNYSGCVI EVNLNESTVL IPDECKVSNA TA
|
| |