Gene Cmaq_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1865 
Symbol 
ID5709665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1940449 
End bp1940877 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content43% 
IMG OID641276372 
Producthypothetical protein 
Protein accessionYP_001541672 
Protein GI159042420 
COG category[S] Function unknown 
COG ID[COG1786] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000298888 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.822078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGG TGCGTGCGCT TAAGGGTAAT ACCGTCCACG GTAATGGTGT TGTATCAGGG 
GAGTTAATTG CCATTAATAC ACCAATATCA TTCCTAGGTG ATGTTGATGG TGCCAGGGGT
ATTGTTAAGG TTAAGGGGAT GGAAATCAAT ATAGCTGGTA AGATCCTTGC ATTACCATAC
TCCACCGGTT CAACGGTGGG TCCATACGTA ATGTATAAGT TAGCTAAGTA CGGTAAGGCG
CCATTAGCCA TACTCACCAT TAAGCCTGAC ACATTAGTAC TGGTTGGGTC AATTATGGCT
AACATACCCT TAGTAATTAA TATTCCTGAG GAAATACTTA ACTACAGTGG ATGCGTAATT
GAGGTGAACC TAAATGAGTC AACAGTACTC ATCCCAGATG AGTGCAAGGT TAGCAATGCT
ACTGCTTAG
 
Protein sequence
MRQVRALKGN TVHGNGVVSG ELIAINTPIS FLGDVDGARG IVKVKGMEIN IAGKILALPY 
STGSTVGPYV MYKLAKYGKA PLAILTIKPD TLVLVGSIMA NIPLVINIPE EILNYSGCVI
EVNLNESTVL IPDECKVSNA TA