Gene Cmaq_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1856 
Symbol 
ID5709613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1932676 
End bp1933206 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content43% 
IMG OID641276363 
Productheat shock protein Hsp20 
Protein accessionYP_001541663 
Protein GI159042411 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTGGT TTGAGGACTT TGATGAATGG TTTAGAAAAT GGAGGAAGTT TGTTGAGGAA 
TTTGAAAGGG AGGTTGAGAA GGAGATTGAG GATACTTTAA GACCCCTAAG TGAGAAGCAG
GGTTCAAAGA AGGGGAAGAG TAACGTCTAC TACTACGGCT TCGAAATCAC AATGGGTCCT
GATGGTAAGC CTAAGATTAA GGAGTTCGGT AATGTTAGGC CATGGGGCAG GCCACTGGTT
AGTGAGGAAT CTGAACCATT AACTGATGTT TATGAGGAGG AGGATACAGT TAAGGTAATA
ATGGATATGC CGGGTGTTGA TAAGGATGAC ATAAATATCA GCATTGAACC AGATGGGAGG
ACGCTCATCG TTGAGGCTAA GGGGAGTGAT AGGAGTTATA GGAAGGAGCT TCAATTACCC
ACTGAGGTTG ATGCAAGTAA GGCTAAGGCA ACATACAAGA ATGGGGTCTT AACAATAGAA
TTACCGAAGA AGAATAAGGG TAGTAGGGGT ACTAAGATTA AGGTTGAGTA G
 
Protein sequence
MSWFEDFDEW FRKWRKFVEE FEREVEKEIE DTLRPLSEKQ GSKKGKSNVY YYGFEITMGP 
DGKPKIKEFG NVRPWGRPLV SEESEPLTDV YEEEDTVKVI MDMPGVDKDD INISIEPDGR
TLIVEAKGSD RSYRKELQLP TEVDASKAKA TYKNGVLTIE LPKKNKGSRG TKIKVE