| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1855 |
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| Symbol | |
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| ID | 5709612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1932386 |
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| End bp | 1932673 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641276362 |
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| Product | RNA polymerase Rpb5 |
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| Protein accession | YP_001541662 |
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| Protein GI | 159042410 |
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| COG category | [K] Transcription |
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| COG ID | [COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAGGA AGAGTACAAC AGAGAGGAAG CGTAAGACTA AGGCTGAGGA GGTTTTAGAG
AAGGTACTTA ATCATGAATT AATGCCTAAG GCCGAGGTGG TGCCTAAGGA TAATGTAAAG
GCGCTACTTA GGAGACTTAA TGCAGCGCCA TGGCAACTAC CCTGGATTAG GAGTACTGAT
CCATTGGTTA GAAGCCTGGG TGCCAAGCCA GGGGATATAA TTAGGATAAT TAGGAAATCC
CCCACCGCCG GTGAAATTGA GGTTTACAGG TTCGTTGTCC CGGGTTAA
|
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| Protein sequence | MPRKSTTERK RKTKAEEVLE KVLNHELMPK AEVVPKDNVK ALLRRLNAAP WQLPWIRSTD
PLVRSLGAKP GDIIRIIRKS PTAGEIEVYR FVVPG
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