Gene Cmaq_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1852 
Symbol 
ID5709598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1929827 
End bp1930312 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content34% 
IMG OID641276359 
Producthypothetical protein 
Protein accessionYP_001541659 
Protein GI159042407 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1325] Predicted exosome subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATAA ACCACCACCC CCTTAATAAG TACTGGCTCA TGTGCCTAAT AGACAGGATA 
GATGTGGAGA CCCATGCGCA TGCCACGGAG GATTACGATA AGGTTATTAC TGCTTTAACT
AACTTACTTG GGTTAACAGT GATTAAGCTT ATTGAGACTA ATTCACTTAG AGGTCATTAT
AATAATCCAA TTAAGGTTTT CAAACTTACC TTAAGGTTAA GGAACTGTAG TAATGATAAC
TTGGTTAAGA GTATTGCAGC AAAGTTATCT GATGATGATA AGAGGATTCT CAGGATTTCA
CTGGATTCAA GGATTAACGG TAATAAGCTT TACCTACGCT TCGATAAGCA GAGGCTTTAT
TTAAATACTG TGGCATTAAG TGATAGTGAT GATGTTGTTA AGGTTATTAT ACATGTTAAC
CCAATTAAAT TAAGGGATAG TAATATGTTT AATATATTAA GGGAATTGGG CTTATTAATC
GATTAA
 
Protein sequence
MFINHHPLNK YWLMCLIDRI DVETHAHATE DYDKVITALT NLLGLTVIKL IETNSLRGHY 
NNPIKVFKLT LRLRNCSNDN LVKSIAAKLS DDDKRILRIS LDSRINGNKL YLRFDKQRLY
LNTVALSDSD DVVKVIIHVN PIKLRDSNMF NILRELGLLI D