| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1847 |
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| Symbol | rps28e |
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| ID | 5709593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1924352 |
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| End bp | 1924594 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641276354 |
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| Product | 30S ribosomal protein S28e |
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| Protein accession | YP_001541654 |
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| Protein GI | 159042402 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2053] Ribosomal protein S28E/S33 |
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| TIGRFAM ID | |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTG AGGGTGGTGA AATTAAGTTA AGCCCATACG ATGACGCCAC AGCTGCAGTG
GTGGTTCAGA TACTGGGTAG GACTGGGGTG GCTGGTGAGG TTAATATTGT TAGGGTTAGG
ATACTTGAAG GTAGGGATAA GGGGAGGATA ATAACAAGGA ACATTAAGGG CCCCGTGAGG
GTCGGGGACA TATTAATGCT TAGGGAGACT GAACGTGAAG CAAGAAAGAT AACAGTGAAG
TAA
|
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| Protein sequence | MAGEGGEIKL SPYDDATAAV VVQILGRTGV AGEVNIVRVR ILEGRDKGRI ITRNIKGPVR
VGDILMLRET EREARKITVK
|
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| |