| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1837 |
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| Symbol | rpl6p |
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| ID | 5709916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1914803 |
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| End bp | 1915390 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641276343 |
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| Product | 50S ribosomal protein L6P |
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| Protein accession | YP_001541644 |
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| Protein GI | 159042392 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03653] archaeal ribosomal protein L6P |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG TGCCTTACTT ATCAGATACC ATTGAGGTGC CTGATGGGGT GGAGGTTAAT
GTTGAGGGAG GGGAATTGAA CTACAGGGTA ACCGTTAAGG GGCCCTTGGG TTCAGTGGCA
AAGGAGTTTA AGGGATTACC AGTACTGGTG AGTTTAAGGG ATGGTAAAGT CGTGGTGGAG
GGTTTTGCAT TGGATAGGAA GGCTAAGTCC ACGGTGTTCA CTGTTGCTGG GCACATTAGG
AACATGATAA TTGGGGTAAC TAAGGGTTGG AGGTATAAGC TTAAGGTGGT TTACGCCCAC
TTCCCAATAA GCGTTAAGGT TCAAGGCAAT AGTGTGGTGA TAGAGAATTT CCTGGGTAGG
AGGTCTAAGA TAATTCTCCA AATACCACAG GGTGTTAAGG TTCAGGTGGC TAAGGATGAT
ATAGTGGTGG AGGGTATTGA TAAGGAACTG GTTAGTCAAT TCGCGGCAAA CATTGAGTTA
GCCACAACAC TCAGGGGTAA GAATAGACCC AGTCCCCACG GTAGAGAATC AGCGCCAGGC
ATATTAGACG GCATATACGT TTACGCCTCA GAGAACATTA AACAGTAG
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| Protein sequence | MAKVPYLSDT IEVPDGVEVN VEGGELNYRV TVKGPLGSVA KEFKGLPVLV SLRDGKVVVE
GFALDRKAKS TVFTVAGHIR NMIIGVTKGW RYKLKVVYAH FPISVKVQGN SVVIENFLGR
RSKIILQIPQ GVKVQVAKDD IVVEGIDKEL VSQFAANIEL ATTLRGKNRP SPHGRESAPG
ILDGIYVYAS ENIKQ
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