Gene Cmaq_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1821 
Symbol 
ID5710287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1899449 
End bp1900285 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content46% 
IMG OID641276327 
Productmannonate dehydratase 
Protein accessionYP_001541629 
Protein GI159042377 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.640781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGG AGGCCCATGT TAAGGACGGC TTGCACTGGC TCTCATGCTT CAAGGCTCAG 
CAGGTGGCTG AGTTCTCACT AAGGTCAATA CTAAGGGCGC TTGGGAGACC AGCCTTCGGG
CACAACCTAG TGGCGTTCCT AAACGAGTTA GCGGGCATTT GCCCAGGGCT CACGACCGAG
CTCAGGTTCT GTGTGGGTTA CCTGGATAAG ATGTACGTAA GTGGATTCAA CTATGGCGAT
ATTGAGAAGG CACCGCCGCA TAGGTTGGTT AAGGAGTACG GTGTTACCCA CGAGAAGCTT
TGGAATAACC TTAGGGAGTT CCTTGAGTAT ATAGTGCCAA TTGCGGAGCA GAGTAATGTT
AAGATAGCAA TGCACCCCGA TGATCCACCA ATACCCGAGT TTAGGGGTAT ACCGAGGATC
ATGAATTCCA TTGAGTCCTT TGAGAAACTA CTGATCCTAG TCAGGAGTGA TTATAATGGT
ATAACTCTAT GTCAAGGAAA CTTCACATTA ATGACTGACG ACCTACCAAG CGTCATTAAG
AGGTTTAGGG ATAGGATATT CTTTGTGCAT TTCAGGGATG TTAAAGGTGA TAGGTATAAT
TTCGTGGAGA CGTTGATAGG TGAGGGTAAG ACGGACCTGG TGGGGGTCAT GAGGGCGTAC
GTGGAGATTG GCTATAATGG TTACGTTAGG GTTGATCACA CACCAACCCT TGAGAATGAC
GCAGAATTAG GTGCACCTGG TTATAACTAC CTGGGTAGAA TCTACACAAT AGGTTATATT
AAGGGCCTTT ATGAAGCAGT TAAGAGGGAA TTTAGTAAGG AGATATTAAA TGCATAA
 
Protein sequence
MNTEAHVKDG LHWLSCFKAQ QVAEFSLRSI LRALGRPAFG HNLVAFLNEL AGICPGLTTE 
LRFCVGYLDK MYVSGFNYGD IEKAPPHRLV KEYGVTHEKL WNNLREFLEY IVPIAEQSNV
KIAMHPDDPP IPEFRGIPRI MNSIESFEKL LILVRSDYNG ITLCQGNFTL MTDDLPSVIK
RFRDRIFFVH FRDVKGDRYN FVETLIGEGK TDLVGVMRAY VEIGYNGYVR VDHTPTLEND
AELGAPGYNY LGRIYTIGYI KGLYEAVKRE FSKEILNA