| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1816 |
|---|
| Symbol | |
|---|
| ID | 5710282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1894003 |
|---|
| End bp | 1894374 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641276322 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001541624 |
|---|
| Protein GI | 159042372 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.337557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAC TAATAATAAA CCCATATAGG GATGCCGAAA AAATATGGCT TGGTAACAAG
CCTGGAGAAA TAAGGAAGGT TTTTAGGACT ATTAGCCCCC AATTAACGGG GAGTACGATG
TTTGTCGCTG GGATCACCAT ATTTGAGCCT GGTGAATCTA GTTCCTTACA TTCCCACCCA
AATTCTGAGG AGATTGACTT TGTAGTTCAA GGTTGTGGGG AAGTAGAGTC TGAGGGAGAG
AGGAGGCCCT TTAAGGAACA TGACTTCATG TTTATACCCA AAGGAGTTGA ACATAGACAT
ATAAACACTT GTGACAAGCC GCTGATACTG TTATGGATTT ACTCACCACC AGGCGAGCTT
CCTAAGGAGT AA
|
|---|
| Protein sequence | MKILIINPYR DAEKIWLGNK PGEIRKVFRT ISPQLTGSTM FVAGITIFEP GESSSLHSHP
NSEEIDFVVQ GCGEVESEGE RRPFKEHDFM FIPKGVEHRH INTCDKPLIL LWIYSPPGEL
PKE
|
|---|
| |