| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1801 |
|---|
| Symbol | |
|---|
| ID | 5708824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1877835 |
|---|
| End bp | 1878848 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641276310 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_001541612 |
|---|
| Protein GI | 159042360 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000372137 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.409693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAG GGCACTTTAA ATGGTTAAGT GAACATAAGG TTGACTTAAA CATTGCCAGC
AGCGGTATGA TACCGGTTAG TAGGAGTGAC GTGGAAAAGT TGGGTGAACC CACTGATATC
ATGGAGGCTC TGAGCAACAT CTATAATGTA TCCACTAAGG CTATTGCGTT AACCCATGGT
ACACAGGAGG GCAATTTCGC AGTCCTATCG GCAATTAAAG ATGCTGTGGA TCAGGTTATA
ACAGTGGTGC CTGAGTATGA GCCGATTAGG GTTTTACCAA GTTTCCTTGG GCTTAGGCGA
ATTGAGGTTA AGGTGAATCA CGGGTTAAGT GAATTAATCA ACTATATTAA ACCCAGGTCA
GCTTTATTCT TCTCCAATCC AAATAATCCA CTGGGCATGC ACTTAAGTAG GGGTGAGATT
AGGGATCTTG CTGATGAGGC TAGGAGGAAG GGCTCATACT TAATCATTGA TTCAATATTC
CTTGAATTCG TCACAAGTGA TTTACGTGAC CTACCCCTGG AGAATACCGC ATACACCTTT
AGTACCTCTA AATTCTACAC TGTTGATTCC TTTAAGGTTG GTTGGATTAT TGGTGATGAG
GAGCTTATTC GAAGAGCCGT TAACGTAATT AACCTAGTAA GCCCCCTGGT TATTGGACTT
GAGGCATCCT ACGTCTCCAT AATGCTCCAG AATAGGGATT GGTTTAGGAG AAGAAACCTA
AGCATAATTT CACCTAATAG GGAATCATTA ATGAGTATTA GTGAATCATT AGGTAACTTA
ATTAAGGTAA CTTACTTCAA TCACATGCCC ATAGCCTACG TAACCACTAA GTGCAATGTT
GACAGTCTTG AATTAGCCAA TGAATTATTA AGAAGAGGAG TCTTAACTGT TCCAGGATTC
TACTTCGGTA TTAATAATGG AATTAGGATT GGCTTAGGCT CAGTTAACCA CGACACATTC
ACTAAGGCGC TTAACGTAAT GGTTAACGTG ATTACGGGCT TATGCACCAG GTAA
|
|---|
| Protein sequence | MEIGHFKWLS EHKVDLNIAS SGMIPVSRSD VEKLGEPTDI MEALSNIYNV STKAIALTHG
TQEGNFAVLS AIKDAVDQVI TVVPEYEPIR VLPSFLGLRR IEVKVNHGLS ELINYIKPRS
ALFFSNPNNP LGMHLSRGEI RDLADEARRK GSYLIIDSIF LEFVTSDLRD LPLENTAYTF
STSKFYTVDS FKVGWIIGDE ELIRRAVNVI NLVSPLVIGL EASYVSIMLQ NRDWFRRRNL
SIISPNRESL MSISESLGNL IKVTYFNHMP IAYVTTKCNV DSLELANELL RRGVLTVPGF
YFGINNGIRI GLGSVNHDTF TKALNVMVNV ITGLCTR
|
|---|
| |