Gene Cmaq_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1798 
Symbol 
ID5708821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1874399 
End bp1874863 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID641276307 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_001541609 
Protein GI159042357 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000155018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.388936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAACC TACATTACAG TGGTTCATTC AACTTAACCA AACCCCCCAG GGAGGTCACT 
GGGGCTTTAT CTAATTTAAG CCTAGTAATC AAGTGCATCC CCAACGTCAC CAGCTACGAG
TTAATTAGTG AATCAAAGGC TAAGGTTAGG TTCAGGGTTG ACCTAGGCGA TGAAGTACCG
GTGGCTGAAT TAAGGAGGGT GACATCAGAT ACTGTTATTG AGGTTACTGA GGCATCGGAA
AGCAGTATTA GGCTGAGGGT GAATGGTAGG GCTGCTGGTA GTTCAATAGA AGTCACATTA
AGCATAATCG TTGAACCCAA TAATGGTGGT TCCAGGGTTA ATTGGAGCGC CGATGCGGGT
TTAGGTAGGC TTCTTCAAAT GATGGGTAGG TTCATTAACA TTGATTCAAT GGTGGAGAGG
ATAGCTAATG ATACGATTAA TGGTATAGTA AAATGCCTTA GTTAA
 
Protein sequence
MANLHYSGSF NLTKPPREVT GALSNLSLVI KCIPNVTSYE LISESKAKVR FRVDLGDEVP 
VAELRRVTSD TVIEVTEASE SSIRLRVNGR AAGSSIEVTL SIIVEPNNGG SRVNWSADAG
LGRLLQMMGR FINIDSMVER IANDTINGIV KCLS