Gene Cmaq_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1793 
Symbol 
ID5708876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1867362 
End bp1868813 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content47% 
IMG OID641276304 
ProductL-aspartate oxidase 
Protein accessionYP_001541606 
Protein GI159042354 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.410879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACA TAATCGGTAG TGGTATAGCG GGGCTTTCAG CCGCGATTTC ACTGAAGATG 
AGTAATTACC CAGTTACCGT GATTACTAAG AGGGTTCAGG GAGGCTCAAG CTACGAATCA
AGGGGTGGAA TAGCAGCCGC AACGGCACCC AATGATTCAC CTGAGCTCCA TGCCCAAGAC
ACCATAGCCG TGGGTGATGG ATTATGCGAT GTTAAGTCAG TGGATTACTT CACAAGGGAG
GCCCTAGAGG CCATAGAGAC CTTGGAGAAA TGGGGGTTTG AGTTCGATAA GGACCTTAGG
CTTGAGGCAG GTCATAGTAG GAGAAGGGTT CACCATAGGA TGGACTCCAC AGGCATGTTC
CTAACGAACT TCCTACTTAA ACTAGCCACT AAGCTTGGTA TCAATATTGT TGAGGATAGG
GTTATGGCAT TGAAGGTTAG GGGTAATGTT GTTAAAGGCT TCATAACCAC TGGGGGTGTT
TCCATAGATG ATGCCGACTC TGTGATATTG GCAACGGGCG GTTACGCCTA CCTCTGGAGC
TACACCTCAA ACCCACGTGA CAATACAGGC GATGGTGTTG CCTTAGCCTT TAGGGCTGGT
GCCGTTGTTG GTGACTTGGA ATTCGTTCAA TTCCACCCCA CGGTCACTGT AATAGACGGC
GAATCCTTCC TATTAACAGA GACCCTTAGG GGTGAGGGCG CGGTTTTAAT TAATGATAAG
GGTGAGAGAT TCGCTTTCAA GTACCATGAA AAGGGTGAAT TAGCACCTAG GGATGTGTTG
TCCAGGGCTA TTTACAATGA GTATAGGCTT GGGCGCAGGG TTTACATGGA TTTAAAGCCC
ATTGATAATT TCGAGATCAA ATTCCCATCA GTTAACGAAT TCCTGAGACG CCATGGACTT
ACCAGGAATG ACTTAATACC CGTAGTCCCA GGTGCCCATT ACTCAATAGG TGGCGTTAGG
GTTAATATCA GGGGTGAATC AACAATAAGG GGACTCTATG CAATCGGTGA AGTTGCGAAT
ACGGGGCTAC ACGGCGCCAA TAGACTAGCC AGTAATTCAC TGCTCGAGGC CCTGGTCATG
GGAATCAACA TGCCATTGCA CATTGGTGAG GATTGGGAAG GCCCAGACCT AAACGATGGG
GAGGTTCTGA ACGTTAAACT ACCAAGTGGT AGTCGTGAGA TGGGTCTTGA GGAAATTAGG
AGGCTTAATT GGGATTACCT GGGTATTATT AGGGATGGGG ATGAATTAAG TAGATTAATC
AGTATTTATG AGGATGTTTA TTTAACAGGG ATTGATGAGT GGTCGAATGC GGCATTGATT
TCCTACTTAA CGGCTAAGGC AGCCTTAATG AGAAAAGAGT CACGGGGCTC ACATTACAGG
GCTGATTATC CTAGTAGGGA TGATGCCAGG TTCAGAAGAA GGATTTACTT CAGGATGATG
GATCATGATT AA
 
Protein sequence
MIYIIGSGIA GLSAAISLKM SNYPVTVITK RVQGGSSYES RGGIAAATAP NDSPELHAQD 
TIAVGDGLCD VKSVDYFTRE ALEAIETLEK WGFEFDKDLR LEAGHSRRRV HHRMDSTGMF
LTNFLLKLAT KLGINIVEDR VMALKVRGNV VKGFITTGGV SIDDADSVIL ATGGYAYLWS
YTSNPRDNTG DGVALAFRAG AVVGDLEFVQ FHPTVTVIDG ESFLLTETLR GEGAVLINDK
GERFAFKYHE KGELAPRDVL SRAIYNEYRL GRRVYMDLKP IDNFEIKFPS VNEFLRRHGL
TRNDLIPVVP GAHYSIGGVR VNIRGESTIR GLYAIGEVAN TGLHGANRLA SNSLLEALVM
GINMPLHIGE DWEGPDLNDG EVLNVKLPSG SREMGLEEIR RLNWDYLGII RDGDELSRLI
SIYEDVYLTG IDEWSNAALI SYLTAKAALM RKESRGSHYR ADYPSRDDAR FRRRIYFRMM
DHD