Gene Cmaq_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1771 
Symbol 
ID5709106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1845244 
End bp1846419 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content43% 
IMG OID641276282 
Productthreonine synthase 
Protein accessionYP_001541584 
Protein GI159042332 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATAA ATAAGTTAAG TAAATCCCTT AGAGCAGGTG GGGGTTGTGG AGGAAACAGA 
ATAGGGTTAG GTAAGTATGT TTTCAAATGC CCTAAGTGTG GGTATGAGAC CCAACCTGAG
GCAGGTAAAT TCACATGCCC AAGATGCGGC TCATTAATGG AGGCTATTCT AGCCGAGTTG
CCTAAGGATA TTAAACTCAG GTACAGGAGA AGACTGGGTG TCTGGTCGTA TTCACAGTTA
CTGCCTGAAC CTAAGAATAG GGTTACGCTT AATGAAGGTG GGACACCATT AATAAGGATT
AGTAAGGGAT TATTCGGTAA GTTTGAGGGT CTTAACCCAA CTGGCTCATT CAAGGATAGG
GGTATGGCTA TTGGGGTTAG TTTAGCTAAG GCAATAGGGG TTAGTAATAT TGTGGTTGCA
TCCACCGGTA ATACTGCAGC CTCAGCGTCA GCCTATGGTG CTAGGGCTGG GTTAAGGGCC
ATAGTTCTCC TACCCAGTGG TAAGGTGGCT AGAGGTAAGT TAGCTCAGTC AATTATCCAC
GGTGCAAGCA TAATGAGTAT TGATGGTTAC TTTGATGATG CGTTAACTGA GGCAATGAAC
ATGTTTAAGG CTGGTAAGGC ATACTCCTTA AACTCAATAA ACGCCTGGAG ACTTGAGGGG
CAGAAGAGCA TTGCCTACGA GATATATGAG GACATTAAAG TACCGGATAA CGTAATAGTA
CCCGTTGGTA ATGCAGGCAA CATATACGCC ATATGGAAGG GGTTCTGGGA ATTAATGCAG
ATTGGGTTAA TAGATAAGGT ACCTAGGATG ATTGGTGTTC AAGCTGAGGG TGCATCACCA
CTTTATGAAA CCTGGAGGAG GGGATCCAGT GAGTTAATTG AGGTTAAGGA ACCTAAGACT
GTGGCATCTG CAATAAGGAT TGGTAAACCA GTGAATTGGC TTAAGGCCCT TAAGGCGGTT
AATAATTCAG GTGGATTACT AGTGACGGTT AATGATAATG AGATAATGAT TGCTAGAGGT
AGGTTAGCTA GGAGAGGTAT CTTTGTTGAA CCAGCCAGTG CATCAACGTA TGCTGCATAC
ATTAAATTAA TTAGGAACAG TGTAATAAGT AATGATGAAC GCACCGTACT TGTATTAACT
GGGCATGGTT TAAAGGACCC TGATTCAGTT AAATGA
 
Protein sequence
MLINKLSKSL RAGGGCGGNR IGLGKYVFKC PKCGYETQPE AGKFTCPRCG SLMEAILAEL 
PKDIKLRYRR RLGVWSYSQL LPEPKNRVTL NEGGTPLIRI SKGLFGKFEG LNPTGSFKDR
GMAIGVSLAK AIGVSNIVVA STGNTAASAS AYGARAGLRA IVLLPSGKVA RGKLAQSIIH
GASIMSIDGY FDDALTEAMN MFKAGKAYSL NSINAWRLEG QKSIAYEIYE DIKVPDNVIV
PVGNAGNIYA IWKGFWELMQ IGLIDKVPRM IGVQAEGASP LYETWRRGSS ELIEVKEPKT
VASAIRIGKP VNWLKALKAV NNSGGLLVTV NDNEIMIARG RLARRGIFVE PASASTYAAY
IKLIRNSVIS NDERTVLVLT GHGLKDPDSV K