Gene Cmaq_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1749 
Symbolrps8p 
ID5709440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1826393 
End bp1826785 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content45% 
IMG OID641276260 
Product30S ribosomal protein S8P 
Protein accessionYP_001541562 
Protein GI159042310 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.247305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATGC TTGATGTCTT ATCCAACGCC TTAATGAGCG TAAAGAACGC GGAGTCCAGG 
GGTGATAGGC AGGTTATTAT TTGGCCATCT TCGAAGCTAA TAGGGAATGT ATTAAGGGTC
ATGCAGAGGT ATGGTTATGT TGGTGAGTTT GAGTACGTGT ACGATGGGAG AGGTGGGAAG
TATGTTGTTC AACTACTGGG TAGGATAAAT GATATCGGCG CCATTAAGCC CAGGTTCCAT
GTTAAGGTTG ATGAACTACA GAAGTGGGAG GAGAAGTACC TACCGGCTAG GCAGGTAGGC
ATATTGATAC TAACAACCTC TAAGGGCGTG GTATCTCACC TTGAGGCTAG GGAAAATAGG
GTTGGAGGTA TTTTAGTGGC TTATGTTTAC TGA
 
Protein sequence
MVMLDVLSNA LMSVKNAESR GDRQVIIWPS SKLIGNVLRV MQRYGYVGEF EYVYDGRGGK 
YVVQLLGRIN DIGAIKPRFH VKVDELQKWE EKYLPARQVG ILILTTSKGV VSHLEARENR
VGGILVAYVY