| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1746 |
|---|
| Symbol | |
|---|
| ID | 5708654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1824285 |
|---|
| End bp | 1825331 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641276257 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001541559 |
|---|
| Protein GI | 159042307 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGTAG CAGTAACCTA TGATACCTTA AGTAGATGGG GTGGACAAGA ATTAGTAACA
TACGCCATGG TTAAGGCTCT TAGTGAAAGT GGGTTCACAG TGGATGTTAT CCTACTCTTC
AATGGGGGGA TAGACAGCAG GATCAATGAT ATACCAGCCC GAAGGATAGT AAGTGCTTTT
GATCATGATC CTAATCTACC CATACGTGGG TTAAGTAGAA ACATTATAAC AGGAATAATG
AGTTTAGGCT ATGATTTAAC AATAAACACT GTTTACCATG TTATGATTTG GCCATTCGAT
ATAGGTTACT TAAATAACCC AGGAACATAC ATGCCACCTT ATAGGCTTAG GAGGAGAATT
CTCCTAGAAT TTAATAGAGT AGTATTACCT ATCCTAGGGC CTAGGCTACT TCTGGCTAAT
TCAAAGTGGA CTCTTAATCA ATTACCCTAT AGACCAAGGT TAAGCGGTGT GCTTTATCCC
CCAGTAATGC CGCATCAATG CGGTTCAGTG AGTAAAGAGG AAATGGTGGT TACTGTGGGT
AGAATAGCCC CTGATAAGAG GATTATAGAT GCTGTTAAGA TAATGGAGGC AGTCTACGCT
AATTACCCTA AGGCCTCATT CTACGTAATT GGACTACCCT ACAACCAGGA GTACTTTAGG
CTTGTTAAGG AGCAGGCTAA GCATGTTGAA TTCATACTTG ATGCCAGTGA GGAAACCAAG
TGGGATTACT TATGTAGAGC CAAGGTACTA CTCCACACTG CTATCAATGA GCATTTCGGT
CTTGTTGCAG CTGAGGCCCA GTACGCTGGG GTAGTGCCTG TTGTGCATAA GTCGGGTGGC
TTATGGAGTG ACATAGTTGG ATATGGTGAA TTTGGGTTAG GGTACTTAAG CAATAATGAG
GCTGTTGAAT CAATAATCAG GCTGCTGAGT AATGGGGAGT TATTTAACGC CTACAGTATG
AGGGTTAAGG AACATTCAAT ACTATTCACC TATGAGGCCT TTAAAAGTAG GCTAATAAGC
TATGTTAAGT CATTAATTAA ACCTTAA
|
|---|
| Protein sequence | MNVAVTYDTL SRWGGQELVT YAMVKALSES GFTVDVILLF NGGIDSRIND IPARRIVSAF
DHDPNLPIRG LSRNIITGIM SLGYDLTINT VYHVMIWPFD IGYLNNPGTY MPPYRLRRRI
LLEFNRVVLP ILGPRLLLAN SKWTLNQLPY RPRLSGVLYP PVMPHQCGSV SKEEMVVTVG
RIAPDKRIID AVKIMEAVYA NYPKASFYVI GLPYNQEYFR LVKEQAKHVE FILDASEETK
WDYLCRAKVL LHTAINEHFG LVAAEAQYAG VVPVVHKSGG LWSDIVGYGE FGLGYLSNNE
AVESIIRLLS NGELFNAYSM RVKEHSILFT YEAFKSRLIS YVKSLIKP
|
|---|
| |