| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1742 |
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| Symbol | |
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| ID | 5708650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1819589 |
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| End bp | 1820335 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641276253 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_001541555 |
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| Protein GI | 159042303 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAGTC CACAGATGGC TGGGTATGAT CGGGCTATAA CAATATTTAG CCCGGAGGGT
GAATTATACC AGGTTAGGTA CGCTGGTGAA GCTGTTAAGA GGGGCTGGGC TACAGTTGGC
TTAAAGTGCT CTGATGGTGT TGTGCTTGCC GCTGAAAAAA GGAAGCTTGG CCCATTAATA
GACCTTAATT CAATAGAGAA GGTATACATG ATCGATACCC ATATTGGTGC AGCCTCAGCT
GGATTACTAT CAGATGCCAG AATTCTAATA GATTACGCTA GGGAGCAGGC CCAGGTATAT
AGGTTACTTT ACGATGAGCA GGCTGACGTT GAGTATATAA CTAAGAGGAT TAGCGACCTT
GAGCAAGCCT ATACTCAACA TGGTGGTGTC AGGCCCTTCG GTATAGCGTT AATAATAGGG
GGTGTTGATA AGAATGGTCC TAGGCTTTAC CAAACCGACC CAAGTGGAAT ATACTTCGGC
TACTATGCAA CAGCATTAGG GAGTGGTTCA ACACTTATCC TTGAGTACCT TGAGAAGAAC
TACAAGTATG AAATGGATAT TAACTCCTGC ATTAAGTTAA CCATTAAGTC ATTAAGCCTA
GTGGCTGAGA GCCTTGATGC AGATAGGTTT GAGATCGGTG TAATAGATGC TAAGACTAAG
TCATTCAGGA AGCTAACCAT TGATGAGTTA AGTAAATTAA TCGAGGAGGC TAAGAACGAG
GGGCTTCCGC AGAGGCCAAG CGCGTAA
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| Protein sequence | MFSPQMAGYD RAITIFSPEG ELYQVRYAGE AVKRGWATVG LKCSDGVVLA AEKRKLGPLI
DLNSIEKVYM IDTHIGAASA GLLSDARILI DYAREQAQVY RLLYDEQADV EYITKRISDL
EQAYTQHGGV RPFGIALIIG GVDKNGPRLY QTDPSGIYFG YYATALGSGS TLILEYLEKN
YKYEMDINSC IKLTIKSLSL VAESLDADRF EIGVIDAKTK SFRKLTIDEL SKLIEEAKNE
GLPQRPSA
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