Gene Cmaq_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1739 
Symbol 
ID5708842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1816718 
End bp1817431 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content43% 
IMG OID641276250 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001541552 
Protein GI159042300 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGGA ACGTAAACGG TATTAGGAGT ATATCAAGGA AGGGTGCGTT AAGGGTGTTT 
AATGATTTTG ACATTATTCT GCTTCAGGAA ATTAGGTCAA GTGACTTACC CTTGGATTTA
CTGTCAATGG GTTTTAATGT CTACGGATTC CCAGCAGTGA GGAAGGGGTA TAGTGGTGTA
TTAACGCTAA GTAGAGTTGA ACCAATTAAT GTGATTAGGG GGATTGGGGT GAAGGACTTT
GATGATGAGG GCAGGGTAAT ATCAATTGAG TTACCTGACT TCTACGTAAT CAACGCCTAC
TTCCCGAGGG CCGGTGATGA CCTTAGTAGA CTCTCATTTA AACTAGTCTT CAATAGGAGT
ATTGAGAAGT TTACCTTAGA ACTAAGGATG AGGAAGCCGG TAATCATTTG CGGCGACTTC
AATGCAGTGT ACTCTAGGCG TGACTCAAGT TTTTGGGATG ATAATCACCC AGGCTTAACA
CCATTGGAGA GGCAGTGGTT AAGTGAATTC ATTGGAAAAG GCTTCACAGA TACCTTCAGG
TTAATTCACC CTAATGAGAT TAAGTACTCG TGGAGGAGTT ATAGGGATAG GGGCAAGGCA
ATGAGGATTG ATTACTGCCT TGTTTCAAGT GAATTAACCA ATAGGGTGGT TGACGCCGAT
ATCCTTGATA CCGAGGGTTC AGACCATTAC CCAATTCTCC TGGTGATTAA GTAG
 
Protein sequence
MSWNVNGIRS ISRKGALRVF NDFDIILLQE IRSSDLPLDL LSMGFNVYGF PAVRKGYSGV 
LTLSRVEPIN VIRGIGVKDF DDEGRVISIE LPDFYVINAY FPRAGDDLSR LSFKLVFNRS
IEKFTLELRM RKPVIICGDF NAVYSRRDSS FWDDNHPGLT PLERQWLSEF IGKGFTDTFR
LIHPNEIKYS WRSYRDRGKA MRIDYCLVSS ELTNRVVDAD ILDTEGSDHY PILLVIK