Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1727 |
Symbol | |
ID | 5709783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1804245 |
End bp | 1804676 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641276238 |
Product | hypothetical protein |
Protein accession | YP_001541540 |
Protein GI | 159042288 |
COG category | [S] Function unknown |
COG ID | [COG2090] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.166522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTG ATGTAATTTG GGCTAGGGGT CATGGTAACG TGAAGGCTAC TCATAGGAAC ACCATTGAGA TTACTAAGGA TGATTACATT ACTGAGAGAG GCGACTGCAT AATAGCCTGC TGTGCCGATA AGGCTGCCTC AGACTTGGAT AATGACTTCA AGAAGTTGAT TACCAGTGGT TACTCATTGG TTTTAATGAT TATTGTAGCT GGTTCAAGCA TAGATATTGT GACTGGATTA GGGTTAAGTG GGTTGAGGCT AACTGATGAG AGGAGGATTA TAGTTAGGAG GAGTGGGTAC ATTGATAACG CCACTATTAT GCTTCTTGCC AATAAGGCTG CTAAGGATTT GAATAGGGAT CTTATTAATA AAGCCAGGGA TAGTGAACCA ATTGAGGTGA TTTTAATTGG CTCAGAACTT GAGCAGGATT AA
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Protein sequence | MIIDVIWARG HGNVKATHRN TIEITKDDYI TERGDCIIAC CADKAASDLD NDFKKLITSG YSLVLMIIVA GSSIDIVTGL GLSGLRLTDE RRIIVRRSGY IDNATIMLLA NKAAKDLNRD LINKARDSEP IEVILIGSEL EQD
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