Gene Cmaq_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1727 
Symbol 
ID5709783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1804245 
End bp1804676 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content40% 
IMG OID641276238 
Producthypothetical protein 
Protein accessionYP_001541540 
Protein GI159042288 
COG category[S] Function unknown 
COG ID[COG2090] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.166522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTG ATGTAATTTG GGCTAGGGGT CATGGTAACG TGAAGGCTAC TCATAGGAAC 
ACCATTGAGA TTACTAAGGA TGATTACATT ACTGAGAGAG GCGACTGCAT AATAGCCTGC
TGTGCCGATA AGGCTGCCTC AGACTTGGAT AATGACTTCA AGAAGTTGAT TACCAGTGGT
TACTCATTGG TTTTAATGAT TATTGTAGCT GGTTCAAGCA TAGATATTGT GACTGGATTA
GGGTTAAGTG GGTTGAGGCT AACTGATGAG AGGAGGATTA TAGTTAGGAG GAGTGGGTAC
ATTGATAACG CCACTATTAT GCTTCTTGCC AATAAGGCTG CTAAGGATTT GAATAGGGAT
CTTATTAATA AAGCCAGGGA TAGTGAACCA ATTGAGGTGA TTTTAATTGG CTCAGAACTT
GAGCAGGATT AA
 
Protein sequence
MIIDVIWARG HGNVKATHRN TIEITKDDYI TERGDCIIAC CADKAASDLD NDFKKLITSG 
YSLVLMIIVA GSSIDIVTGL GLSGLRLTDE RRIIVRRSGY IDNATIMLLA NKAAKDLNRD
LINKARDSEP IEVILIGSEL EQD