Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1724 |
Symbol | |
ID | 5709780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1801273 |
End bp | 1802241 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641276235 |
Product | hypothetical protein |
Protein accession | YP_001541537 |
Protein GI | 159042285 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGATTT TACTTGGGAC GCCGCCGAGG GCTACGCCTA GGCCTTGGAT CGACTTCACT GGTGTTATTA ATGTACCAGT CATAGTGAGT GCCTTTGAGT TACTTAAGGT AAGACCCCCC GGCGACGCCC CATTGCATTC ACTGCTTCAG CATAGTGGGG AGATTTGGGT TGATTCAGGG GGTTATCAAT TCTTAAGCAG GGGTGTTGAA ATAGGGATTG ATGATGTTGC TAAGGTGTAT TCGCGTTTTT GGGATGCCTC AACTTACCTA GCCCTTGACT ACCCACCATT ACCGAGTGAT GACGTTAATA CTGCATTCGG GAAGTTCCGT AAAACCATTA AGGCGTACCA TGAGTTAAGC AAGGTCCTGG AGAGGGAGAA CATAGAGGTC ATGCCTGTAA TCCACTATTA TAGGAATGAG GAGATAGTCC TAGAGGCGTT AAGGAGCATA ATTGACCATA ACCCTAAGGA GATTGCAATA GGGGGACTGG TACCTTACGT TTTAGTCACC AGGAATGTGC CTAAGAATAG TAGGTGGAGG GCATTATCCT TCATAGCTAA AGTGGTGGAG GAATTCAATG GTAGGGTTCA CGTACTTGGG TTAGGTAGCC CATCAATAAC ACCAACACTT GAACTACTGC GTGTTTACTC AACAGATTCC TCAACATGGA GGATTAAGGC GGCCTACGGG AAGGTAATAT TACCAGGTGG GGGTGAGAGG CATGTAACTG GGCGGAGGGT TAACTTCGGT AGGAGGGTTA TTAAGGAGGA TGAACTTGAG GAACTTTACT TATTCCTAAG GGAAACCAAA TTCCCCCTAC TTGAAAAATA CCCTGATTCC CTTTACATGA GTTTCGAGTA TAGGGCATTG GTTAATGCAT GGGTAACCCT AATGAGTAGA AGCAAACCCA GGGGTAGTGG CTTCAGGTTG ATGTATGAGA TGGTTCAAGC CATGCTGGAG CACAGGTGA
|
Protein sequence | MKILLGTPPR ATPRPWIDFT GVINVPVIVS AFELLKVRPP GDAPLHSLLQ HSGEIWVDSG GYQFLSRGVE IGIDDVAKVY SRFWDASTYL ALDYPPLPSD DVNTAFGKFR KTIKAYHELS KVLERENIEV MPVIHYYRNE EIVLEALRSI IDHNPKEIAI GGLVPYVLVT RNVPKNSRWR ALSFIAKVVE EFNGRVHVLG LGSPSITPTL ELLRVYSTDS STWRIKAAYG KVILPGGGER HVTGRRVNFG RRVIKEDELE ELYLFLRETK FPLLEKYPDS LYMSFEYRAL VNAWVTLMSR SKPRGSGFRL MYEMVQAMLE HR
|
| |