Gene Cmaq_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1724 
Symbol 
ID5709780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1801273 
End bp1802241 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content46% 
IMG OID641276235 
Producthypothetical protein 
Protein accessionYP_001541537 
Protein GI159042285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATTT TACTTGGGAC GCCGCCGAGG GCTACGCCTA GGCCTTGGAT CGACTTCACT 
GGTGTTATTA ATGTACCAGT CATAGTGAGT GCCTTTGAGT TACTTAAGGT AAGACCCCCC
GGCGACGCCC CATTGCATTC ACTGCTTCAG CATAGTGGGG AGATTTGGGT TGATTCAGGG
GGTTATCAAT TCTTAAGCAG GGGTGTTGAA ATAGGGATTG ATGATGTTGC TAAGGTGTAT
TCGCGTTTTT GGGATGCCTC AACTTACCTA GCCCTTGACT ACCCACCATT ACCGAGTGAT
GACGTTAATA CTGCATTCGG GAAGTTCCGT AAAACCATTA AGGCGTACCA TGAGTTAAGC
AAGGTCCTGG AGAGGGAGAA CATAGAGGTC ATGCCTGTAA TCCACTATTA TAGGAATGAG
GAGATAGTCC TAGAGGCGTT AAGGAGCATA ATTGACCATA ACCCTAAGGA GATTGCAATA
GGGGGACTGG TACCTTACGT TTTAGTCACC AGGAATGTGC CTAAGAATAG TAGGTGGAGG
GCATTATCCT TCATAGCTAA AGTGGTGGAG GAATTCAATG GTAGGGTTCA CGTACTTGGG
TTAGGTAGCC CATCAATAAC ACCAACACTT GAACTACTGC GTGTTTACTC AACAGATTCC
TCAACATGGA GGATTAAGGC GGCCTACGGG AAGGTAATAT TACCAGGTGG GGGTGAGAGG
CATGTAACTG GGCGGAGGGT TAACTTCGGT AGGAGGGTTA TTAAGGAGGA TGAACTTGAG
GAACTTTACT TATTCCTAAG GGAAACCAAA TTCCCCCTAC TTGAAAAATA CCCTGATTCC
CTTTACATGA GTTTCGAGTA TAGGGCATTG GTTAATGCAT GGGTAACCCT AATGAGTAGA
AGCAAACCCA GGGGTAGTGG CTTCAGGTTG ATGTATGAGA TGGTTCAAGC CATGCTGGAG
CACAGGTGA
 
Protein sequence
MKILLGTPPR ATPRPWIDFT GVINVPVIVS AFELLKVRPP GDAPLHSLLQ HSGEIWVDSG 
GYQFLSRGVE IGIDDVAKVY SRFWDASTYL ALDYPPLPSD DVNTAFGKFR KTIKAYHELS
KVLERENIEV MPVIHYYRNE EIVLEALRSI IDHNPKEIAI GGLVPYVLVT RNVPKNSRWR
ALSFIAKVVE EFNGRVHVLG LGSPSITPTL ELLRVYSTDS STWRIKAAYG KVILPGGGER
HVTGRRVNFG RRVIKEDELE ELYLFLRETK FPLLEKYPDS LYMSFEYRAL VNAWVTLMSR
SKPRGSGFRL MYEMVQAMLE HR