Gene Cmaq_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1690 
Symbol 
ID5708917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1767521 
End bp1768489 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content40% 
IMG OID641276198 
Producthypothetical protein 
Protein accessionYP_001541503 
Protein GI159042251 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.125377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATTA AGGTAACAGT AGTAGTAACA TGTTATAGGA GGTGGATTTA CCTTCCTCTG 
GCTATTAAGT CCATTAGAGC CCAGAGTAGG CAACCTGATG AGGTTATTGT TGTTAAGAGC
CCTGAAGTAA AGCTGCCTGA GGGTTCAATT AAGGTTATTG ATGATGATTC TCCTCACTTA
GGCAGGAAGA TTACTGAAGC TGTTGAAGAG GCTATGGGTG ATGTTATAAT GTTCCTTGAC
GATGACGATG AATTCACAGC GAATAAAGTA TTCATAGTGA GTAAGTTATT CGACAATATT
AGTGAATTAA CTTATGTTCA CAACTCAATC TCATGCATTA CCAGTAGTGG TATGGAGGTG
AGGAAGGTGA GGCATTATTT TAAGATACCA CCTTACGTTA AGCCTTGCAC CCAGGTTAAT
CAGCAGGTAA TGTTTAACCT AAGCAATGAT GGTGAATTCA GTAGATGGCT TTGGGCTGGT
GCGGCCTTTA ACGCTAGTTC AATATCTATT AGAAGAGAGG CATTAATGAA CGTTAAGCAT
TATGTGAATC AAATTAGCGT AGTCTCAGAT GCAATACTCT ACTACAGCGC TGCACTTAAT
GGTGGCTTAG CATTACTAAT ACCTGAAAGG TTAACTAGGT ATAGGGTTCA TGAAGGTAAT
GTCAGTAGGG GTCAGCTTGC CACATTTAAT AACTACGTTG AGTCAATGAG AATGCTGCTT
AATAGGGTTA TTCATGATTA CGCCGTAGTA TGTGAAATGG TTAAAGGTAG TAGGTTTGAG
AAGTATGCAT GTATGGAAAA GGGCATGTAT GCTGCTGTTG CCAGGATCTT TAATGGGCAT
GGTGAGTTAA GCCTAAGGAA TTTAAATACA CGTATGCTTA AGTATTACCT AGTGGCCTTA
CTTCCACATC AATTGAGAAG CATAATTGTG AGGAGGTGGT ATGAGGCATC CTTAAATCCG
TTTACTTAA
 
Protein sequence
MGIKVTVVVT CYRRWIYLPL AIKSIRAQSR QPDEVIVVKS PEVKLPEGSI KVIDDDSPHL 
GRKITEAVEE AMGDVIMFLD DDDEFTANKV FIVSKLFDNI SELTYVHNSI SCITSSGMEV
RKVRHYFKIP PYVKPCTQVN QQVMFNLSND GEFSRWLWAG AAFNASSISI RREALMNVKH
YVNQISVVSD AILYYSAALN GGLALLIPER LTRYRVHEGN VSRGQLATFN NYVESMRMLL
NRVIHDYAVV CEMVKGSRFE KYACMEKGMY AAVARIFNGH GELSLRNLNT RMLKYYLVAL
LPHQLRSIIV RRWYEASLNP FT