| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1687 |
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| Symbol | |
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| ID | 5708914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1764611 |
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| End bp | 1765405 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641276195 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001541500 |
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| Protein GI | 159042248 |
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| COG category | [K] Transcription |
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| COG ID | [COG1395] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0143591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGGA GAAGAGATGA ACACTTAATG GATTATGTAA CAGAGGAGTT GGAGAAGGCT
GGAGCTAAGT CTGTAGTTAT TGATAAGGAT GATTACTCAT ACACCATTGT AGCCAGTGTG
AATAAGGATG GTTTAGGTAA AATGGTTCTT AAAATAAGCT CAGATTCATC AACAATACCG
AGAAGTCACA TAGTTGACTT ACTGATAATG CATAGGGTCT TTAAGGCCAA GCCAATACTG
GTGGATGAGA GTAGGAGGAA TGAGGAGCTT CAGGACGGTG TCCTTTATGA ACATTCAGGC
ATACCTCAAC TGAATCCAAG CACCTTTAGG GATTTGCTTA AGGGTAAGCC GTTGCTCTTT
AAGAATGAGG GGGGTGTAGT TAAGGTTAGG ATAAAGGGTT GGTTACTGAG GGAGCTTAGG
ATGAGGTATG GTTTAAGTCT CGGTGATTTA GCTGAGTTGC TTTCAGTCAG TAGGAAGGCA
GTGTATGAGT ATGAGAGAGG AACCATAGAT GTCAGTGCCG AGAAGGCTCA ACTACTAATT
GAATTATTCG GTGAGGAAAT AGTGGATAGT TGGGATTTAA GCGTTAAGGA TCCTGACCAG
AAGATTATGG AGAGGAGGGT GGAGTTGGGT GATGTACTTA ACCTTAAGGT TAAGGAATCA
TACCTACTGG TTCACACACA TGGTAAGTAC GCCACGGTAA CGGATAAAGG TAATGTACTC
TTAGGTAGTG AGAATAGTAG GGAGGCCGAG GAGGTATCGA GCATACTTGG TGCCCGCTAC
ATTAGAATAC AGTAA
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| Protein sequence | MLRRRDEHLM DYVTEELEKA GAKSVVIDKD DYSYTIVASV NKDGLGKMVL KISSDSSTIP
RSHIVDLLIM HRVFKAKPIL VDESRRNEEL QDGVLYEHSG IPQLNPSTFR DLLKGKPLLF
KNEGGVVKVR IKGWLLRELR MRYGLSLGDL AELLSVSRKA VYEYERGTID VSAEKAQLLI
ELFGEEIVDS WDLSVKDPDQ KIMERRVELG DVLNLKVKES YLLVHTHGKY ATVTDKGNVL
LGSENSREAE EVSSILGARY IRIQ
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