Gene Cmaq_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1666 
Symbol 
ID5709061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1742153 
End bp1743472 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content46% 
IMG OID641276174 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_001541479 
Protein GI159042227 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0107908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGT CCAAGGTTAA GGATAAGTCA TTGGCGGCTA AGGGGAAGCT ACAGATTGAG 
TGGGCTGAAT CACACATGCC AGTGCTAATG GCTATTAGGG AGAGATTCAT TAGAGAGAAG
CCACTTAAGG GTATTAGGAT AGCTGCAAGC CTCCACGTCA CTAAGGAAAC CGCAGTCCTG
GTTAAAACCC TAGCAGCAGG TGGGGCTGAA GTTTACTTAG CCCCAAGTAA CCCACTCTCC
ACTCAAGACG ATGTTGCAGC AGCCTTAGTG GAGGAGGGTA TTCATGTATA TGCTTGGAAG
GGTATGAATA ATAGGGAGTA TTACAACGCA ATAGGCTTCG CTATATCCTC TGAACCAGAC
ATAACCCTTG ATGATGGTGG TGATGTGGCT GGTACACTAC ATAAGTTGGC CCTAGGGATT
ACTGATGAAT CAGTTAAGTA CGCCCTTGAA GTAGCGGGTA ATAGGGATTA CGTAGGCTTA
ACCAGGAAGA TACTTGGTGG TACTGAGGAA ACAACCACAG GGGTTATTAG GTTTAGGGCA
ATGGAGAAGG ATGGTAAGTT AATGTACCCT ATAATAGCTG TTAACGACTC ATACACCAAG
TACCTCTTCG ATAATAGGTA TGGTACCGGT CAATCAACCT GGGATGGGAT AATAAGGGCA
ACAAACCTAC TCATTGCAGG AAAGGTAATT GTGGTAGCTG GATACGGGTG GGTTGGGAGG
GGGGTTGCAA TGAGGGCTAA GGGACTTGGA GCAAGAAGAG TCATTGTTAC CGAGGTTAAT
CCAATAAGGG CCCTTGAGGC TGTTTTCGAA GGCTTCGAGG TAATGCCAAT GAGTGAGGCA
GCTGAAGTAG GTGACATTTT CATAACAGCC ACAGGCGACA TAAGGGTTAT AACCCTCAAC
CACATGTTAA AGATGAAGGA TGGTGCAGTA TTAGCCAATA CAGGCCACTT CAATGTTGAG
ATTGATGTAG AGGCCCTTGA AAAGAACGCC AAATCCAAGA GGGAGATAAG GCCGTATGTA
GTCGAGTACC TTCTACCTAA CGGTAGGAAA ATATACCTAA TAGCGGAAGG CAGGTTAGTT
AACTTATCAG CCGCAGAGGG TCATCCAAGT GAGGTAATGG ACATGTCCTT CAGTAATCAA
GCATTGGCAG CTGAGTACAT TTTAAGGAAT AAAGGTAAGT TAACGCCAAG GGTTTATAGG
CTACCCCAGG AAATTGATGA GGAGATCGCT AGACTTAAGT TAACGGCAAT GGGTGTTAGG
TTTGATTCCC TAACGGAGGA GCAGGCTAAG TATATTTCAA GTTGGGAGAC AGGTACGTGA
 
Protein sequence
MVESKVKDKS LAAKGKLQIE WAESHMPVLM AIRERFIREK PLKGIRIAAS LHVTKETAVL 
VKTLAAGGAE VYLAPSNPLS TQDDVAAALV EEGIHVYAWK GMNNREYYNA IGFAISSEPD
ITLDDGGDVA GTLHKLALGI TDESVKYALE VAGNRDYVGL TRKILGGTEE TTTGVIRFRA
MEKDGKLMYP IIAVNDSYTK YLFDNRYGTG QSTWDGIIRA TNLLIAGKVI VVAGYGWVGR
GVAMRAKGLG ARRVIVTEVN PIRALEAVFE GFEVMPMSEA AEVGDIFITA TGDIRVITLN
HMLKMKDGAV LANTGHFNVE IDVEALEKNA KSKREIRPYV VEYLLPNGRK IYLIAEGRLV
NLSAAEGHPS EVMDMSFSNQ ALAAEYILRN KGKLTPRVYR LPQEIDEEIA RLKLTAMGVR
FDSLTEEQAK YISSWETGT