| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1660 |
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| Symbol | |
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| ID | 5709271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1734486 |
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| End bp | 1736840 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641276168 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001541473 |
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| Protein GI | 159042221 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.624656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00115127 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAATAC TTAAAAATAT TGAAGTATTG TGTACAATTA TGGATCCCTG TAGAACCATT
AGTTTCTTCG CCATTGAGAA TGAATCATTA TTGAAGACTG CAGAAGTTAT TTTAACTACA
AAGGTCTCAA TAAGTGGGTT AACGTATAAC TTAACAATAA GACGACTACC ATTAAGTGCA
ATCACCCTTA GTATTGAGTT AACCGAATCC AGTGGGGTTG CTGAATCTAG AAGCATTAAC
ACTGGTGTTG GTGAATACTC AATAATCATT GACACTAATC CATTATCCTT AACAGTGTTG
AAGAGTGGTA GAGTAGTGTT TAGTAATAAG GTTGCACTAG GCCCTGGTTA CTTTCATAGG
GTTAACAATG AATTACATGT ACCATTCTCA ATAAGCCCAG GTGAAGGTAT TTACGGTATG
GGTGAGTGGT TTGGTAGACT TAATAAGGTT GGGCAGAGGC TTGAGGTATA TGTTGTTGAT
CCAGGGGGTT TACCTAATGA TAAAACTTAT GTGGCCTACC CCTTCTTCTG GTCCACTGAA
GGCTATGGGT TACTCATAGA CACTTACTGC CGTGTTATGC TTGACTTCGG TTCAAGATAC
CTTGGAGTGG GGGAATTAAT AATACCCAGT AACGTTAACA TGTATTTGAT CCTATCCAAT
GAACCGAGTA AAATCATTAA GGCATTCTGG GAACTCACAG GGCATCCTGA AGTACCACCC
CTATGGTCCT TCGGCGTCTG GTACAGTTTA TGGAGGGGTT CAGGTTACAT TTACTCCGAT
TATAAGACGC AGGATGATGT TGTTAAATTC GCTGAGGATG TTAGGAGGCG TGGTTTACCC
GGTGATGTTA TTCACATTGA TCCAATATAC ACCATTAGGC CCCTTAGAGC ATCCTTGAAG
AGGTTTCTCA AGAACCTTGG ACTTACTGAT GATGAGATTA AGGAACTTGA GGAGTACCAT
AGGGTTAACG GGAGGTGGAA TTATAGACCA CTCCTGGAAT ACATTAAATC CAAGTGGCCG
GATAAGTATA CTGAGTTAAT TAACAAGTAC CCATTCACAG TCTCAGACTG CACCTTCGAG
TGGCATGATG GTTTCCCAAA CCCTAGGCTA ATGTTCAGTA GGCTTCATGA GCTTGGATTC
AGGGTAAGCA TATGGGTTAA CCCATATGCA GCAGTGGGTA GTGAATGGTT CAGTGAATTA
AGTGAGCGTA ACCTACTGGT TAAGGTTAAT GGTAGGCCCA TGGTTGAGAC ACCAGCCTTC
ATTAAAGGTG AACTAGTTGA CTACAGGATG TTGACTGATG ACTTCGGGGC AGTGGACTTC
ACTAATGATG ATGCCTGCAG GGCTTACTCA GAGAGGATTA GGCAGCTGCT TGAATTAGGT
GCAGACACTA TTAAGACTGA TTATGGTGAA GGAGCCCCTG AAAATGGTGA ATACTCAGTG
GGCATTAACC CATGTATACA TAACCTCTAC CCAGTGCTTT ACAATAAAGT GGTTTACGAG
ACCATAAGGA GCCTTAAGGG TGAGCCCATT GTATGGGGTA GGTCAGGGGG ATTAGGTATT
CATAAGTACC CAATAAGGTG GACCGGGGAC CCTGACTCCA CACCAAGGGG TATGGCTGCG
TCACTCAGGG GTGTGTTATC AATGGCTACC TCGGGAATAA TGTACTCAAG CGTGGATATT
GGCGGCTACG GTGGTAAACC CACGGTTGAG CTTTACGTTA GGTGGGCTCA AATGGGGCTC
CTATTAAGCC ACAGTAGGTT CCATGGAGTA AGTGAGAGGG AGCCTTGGAG TTATGGTGAA
GAGGCCTACA GTATAGTTAA AGGATTCATT AAGCTTAGGT ACTCCCTAAT ACCGTACATT
TACTCCCAAG TCATTGAGGG TTTAAGGACT GGTAAACCAC TCGTTAGGCC ACTTGTAATG
GATTACCCCA GTGATGAGGT CACCAGGGAT ATTGAGGATG AGTATATGCT TGGCGAGTAC
ATGTTAATAG CCCCAGTGTT CTCAGGGGAT GCTAGGTCGG TTTACCTACC TGAGGGGAAT
TGGTACGATT ACTGGAGTAT GAGCATTATT AGGGGTCCAA CCACTATTAA TGTTCACTCA
CCGTTAAGTA GGGTACCAAT CTACGTTAAG GATGGGGCCT TAATAGCGTA CAGCGCGGTT
GATTCAATGA ACTTAACCAC TGATGTACTC AACAACCTAC TTGTTGAGGT TTACGGTAAT
GCCGGTGAAT TTAACATAGA CTTAGGTAGA TACGGTAAGT TAACTGGTAT ACAGGTTACT
TATGATAAGG TTTACTCAAT GGGTGGGTTT AAGATACGCT TCATTAAGGC GTCACCCCAT
GGTCTAAGCT CTTAA
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| Protein sequence | MGILKNIEVL CTIMDPCRTI SFFAIENESL LKTAEVILTT KVSISGLTYN LTIRRLPLSA
ITLSIELTES SGVAESRSIN TGVGEYSIII DTNPLSLTVL KSGRVVFSNK VALGPGYFHR
VNNELHVPFS ISPGEGIYGM GEWFGRLNKV GQRLEVYVVD PGGLPNDKTY VAYPFFWSTE
GYGLLIDTYC RVMLDFGSRY LGVGELIIPS NVNMYLILSN EPSKIIKAFW ELTGHPEVPP
LWSFGVWYSL WRGSGYIYSD YKTQDDVVKF AEDVRRRGLP GDVIHIDPIY TIRPLRASLK
RFLKNLGLTD DEIKELEEYH RVNGRWNYRP LLEYIKSKWP DKYTELINKY PFTVSDCTFE
WHDGFPNPRL MFSRLHELGF RVSIWVNPYA AVGSEWFSEL SERNLLVKVN GRPMVETPAF
IKGELVDYRM LTDDFGAVDF TNDDACRAYS ERIRQLLELG ADTIKTDYGE GAPENGEYSV
GINPCIHNLY PVLYNKVVYE TIRSLKGEPI VWGRSGGLGI HKYPIRWTGD PDSTPRGMAA
SLRGVLSMAT SGIMYSSVDI GGYGGKPTVE LYVRWAQMGL LLSHSRFHGV SEREPWSYGE
EAYSIVKGFI KLRYSLIPYI YSQVIEGLRT GKPLVRPLVM DYPSDEVTRD IEDEYMLGEY
MLIAPVFSGD ARSVYLPEGN WYDYWSMSII RGPTTINVHS PLSRVPIYVK DGALIAYSAV
DSMNLTTDVL NNLLVEVYGN AGEFNIDLGR YGKLTGIQVT YDKVYSMGGF KIRFIKASPH
GLSS
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