Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1655 |
Symbol | |
ID | 5709848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1729881 |
End bp | 1731542 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641276163 |
Product | glycosyl transferase family protein |
Protein accession | YP_001541468 |
Protein GI | 159042216 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00101138 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGCTA ATACTACCAC GCAAAGCCAA ATACTGCTTA GTAATATAAG TAGAATTATT GAATTTAATA CCAGCAAAAT AATTGAGAAT ATTGAATTAA GGTTTGACCA ATATATAAGT GCAATAAACG TGGTGTTGAA TAATTCAACG TATTACACTC AATCAAATTC AACCATTGGA ATAGCCACTA AGCCAGTACC TAAGGGTTAT GTACCAGTCA TATTAATCAC ATACATAATT TACGCAGTAT TCATGGTGAT TGTGCTTGCT CAATTACTAA TAATGATACA TTCCGCTTAC GCTAGGTTAA GGGTAATGAG GGACGCTAAA CCAACACACA TTAGTAACAT TAATTGGTTA CCCTTAGTTT CAATAATAAT ACCAGTCAGG GGGGAGGGGA TTGACGCCAT TGAGGATGCT GTTAAGAGGA TTACTGGCCT CGATTACCCA AGGGATAAGC TTGAAGTAAT AGTGGCCACT GATGATGATG AAGCCACAGC TAATTTAATT AAGAATTCAG TGGAGAGAAT AGGTAAGACC TATGGATTAC GAACGATAGT TAACTGGAGG AGTAAACCAG TAGGCTACAA GGGTGGTGCA ATTAATGAGG CCGCTAAATT AGCCAGAGGA GATGTTCTAC TGATACTTGA CGTGGACACG ATATTACCGA GGAATTACCT GAAGGTTGCC TTAAGTTACC TTAATGAGGG ATACGATGCC GTTGGAGCAC CATTCCTGGG TGTACCCAAG GTGCCTAATA ACTTTAGCTG GCCTCTAATG ATTTTATTCA ATACACTTAG TGAAGTTCAG ATAGTTGGTA GGGCTCTCTC TAGGTTTAAG AGGGGTTTCT ACATGATTAT AGGTAATAAT CTCCTGATTA GGAGGGATTT CTTTAATAGG ATTAATGGGT TATGCTACTG TAAATCCGAT GACATTGACG TAGCCCTAAG AATATGGTTA ATGGGTGGTA GGATAGGGGT AATGAATGAG AGGGTATTAA CTGAAATACC GAGTACGTAT GATGCGTTCA GATCCCAGAC AATAAGATGG GCCACCAATG ACATGTGGGC TCTTAAGAAG TACTTCACTA AGATACTTAA GTCAAGGAAC AGGAGCCTTG TTGATAAGGT GGATGCCTAC CTATGGTTAC TTAAGTACCC GTTAGTGTAC TTAGGCGTTA TCTCAATAAT AACAATGATA ATAATGCAGG TATTCAATAT ACTGATACCA CCATTACCAA TACTGGTACT CTCAGTACTC ACTGATGTAG TTGGGGCAGC ATTATTAATT CTAATAATTA TGGTTGGGAG AAGGATGAAT TACAGTTATT GGGACTTATT TAAGTCACTT GTTATTGGTG GGTTAACCAT GTATGCGTTA GCGTTCCCGC TAATGATATA CTTAGCTAAG GCCCTATTAA GTGACTTACC ATGGTTATAC ACACCTAAGG CTTCGAAGGC ATTATTAAGG CAGAAGTTCC TTATTGAACG CTTATCAATA ATAGCCCTAA TTGCTGTTGG AGCAGCATTA CTAATGATGG GGCATGTGAT AGTGTCATTA TACGTCTTCG CTAACTCAAT ACTAATACTA ATGGGGTACA GTGTTGGTAC TGTTAAACCA AGCAATAGGT TGATTCACTC CACTCAAATG ATTACTCATT AA
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Protein sequence | MIANTTTQSQ ILLSNISRII EFNTSKIIEN IELRFDQYIS AINVVLNNST YYTQSNSTIG IATKPVPKGY VPVILITYII YAVFMVIVLA QLLIMIHSAY ARLRVMRDAK PTHISNINWL PLVSIIIPVR GEGIDAIEDA VKRITGLDYP RDKLEVIVAT DDDEATANLI KNSVERIGKT YGLRTIVNWR SKPVGYKGGA INEAAKLARG DVLLILDVDT ILPRNYLKVA LSYLNEGYDA VGAPFLGVPK VPNNFSWPLM ILFNTLSEVQ IVGRALSRFK RGFYMIIGNN LLIRRDFFNR INGLCYCKSD DIDVALRIWL MGGRIGVMNE RVLTEIPSTY DAFRSQTIRW ATNDMWALKK YFTKILKSRN RSLVDKVDAY LWLLKYPLVY LGVISIITMI IMQVFNILIP PLPILVLSVL TDVVGAALLI LIIMVGRRMN YSYWDLFKSL VIGGLTMYAL AFPLMIYLAK ALLSDLPWLY TPKASKALLR QKFLIERLSI IALIAVGAAL LMMGHVIVSL YVFANSILIL MGYSVGTVKP SNRLIHSTQM ITH
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