| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1653 |
|---|
| Symbol | |
|---|
| ID | 5709846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1728151 |
|---|
| End bp | 1729215 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641276161 |
|---|
| Product | myo-inositol-1-phosphate synthase |
|---|
| Protein accession | YP_001541466 |
|---|
| Protein GI | 159042214 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1260] Myo-inositol-1-phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.470823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00129381 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGTA ATATAAAGGT ATCAATAGCA GGTGTGGGTA ACTGCGCCTC CGCCCTGGTT
CAAGGGGTTC AGTACTATAG GTTAACTAAT GACGCAACCG GCGTAACATT TAAGGAGATA
AACGGGTACA GTATTAGTGA TATTAAGTTC ACCGCGGCCT TTGATGTTGA CGCCAGGAAG
GTTGGTAAGG ATCTGGCTGA AGCAATATTC ACCCCACCGA ATAATGCATT AAAAATAATC
GACGTTGATA AGACTGGAGT AATCGTTAAG CCAGGACCAT TACTGGACGG CATAGCCCCT
GAACTAGCTG GATCACATAT ACCTGTGGTT GAGGCTAAGG TTGATGATGT TGTTAAGGAG
CTTGAATCCA CAAATTCCGA AATCCTAATT AACTACCTAC CCACAGGTGC CCAGAAGGCA
TCTGAGGCTT ACGCTGAGGC TGCATTAAGG GCTGGTGTAG GCTTTGTGAA TGCCATGCCA
TCTCAAATAG CCACCGTCGA GCAGTGGCAG GCTAGGTTCA CTAAGGCTGG TCTACCACTG
CTTGGTGATG ATATTCAGAA TCAATTAGGG GCCACTGTGC TTCATAAAAC AATAATGCAC
CTACTATCAT TAAGGGGGTT AAAGGTGGTG GGTACGTATC AACTTAACGT TGGTGGAACA
CCTGACTTCC TCAACTTGAA TTATAGGAAG GGGCAGAAGG AGAAGACTAA GACGGCTGCG
GTTAAGAAGA TGGTTAAGGA ACAGGACTTC GACGCCTACA TAACACCAGT GGCGCACGTT
GGCTTCCTGG GTGGTAGGAA GAGAGCCCAC ATGTTCATTG AGGCACAGGG CTTTGCTGGT
GTTCCAGTTA AGATTGAGGT TAGCCTTGAG GTTCATGATC CATGGAACAA CGCAGGCGTT
ATGGTTGATG TATTGAGGTT AATGAAGGTT GCATTAGATA GGGGTGTAGC TGGTCCAATA
TATAGTGTTG CTGCATGGGC CTTTAAGAAC CCACCAATGC ATGCGCCACC TGATGAGGCT
TATAATTGGT TAATTGAGTT TATTGAAGGC AAGAGGGATA ATTAG
|
|---|
| Protein sequence | MKSNIKVSIA GVGNCASALV QGVQYYRLTN DATGVTFKEI NGYSISDIKF TAAFDVDARK
VGKDLAEAIF TPPNNALKII DVDKTGVIVK PGPLLDGIAP ELAGSHIPVV EAKVDDVVKE
LESTNSEILI NYLPTGAQKA SEAYAEAALR AGVGFVNAMP SQIATVEQWQ ARFTKAGLPL
LGDDIQNQLG ATVLHKTIMH LLSLRGLKVV GTYQLNVGGT PDFLNLNYRK GQKEKTKTAA
VKKMVKEQDF DAYITPVAHV GFLGGRKRAH MFIEAQGFAG VPVKIEVSLE VHDPWNNAGV
MVDVLRLMKV ALDRGVAGPI YSVAAWAFKN PPMHAPPDEA YNWLIEFIEG KRDN
|
|---|
| |