Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1652 |
Symbol | |
ID | 5709845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1727015 |
End bp | 1728106 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641276160 |
Product | peptidase M24 |
Protein accession | YP_001541465 |
Protein GI | 159042213 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.329498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00124152 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGGGG ATAAGTTAAG TAGAGTAAGG TCCCTTATTA AGGATAAGGG GGCTACGGCA TTGATTCTAA CTAACCCAAG CAACATGGGT TACCTACTAG GTTATGAGGA TGGGTTACTG GCTTATATTG ATGACTCGGT AATTAAGGTT ATTGCACCAT TACTGGATCG GGAGAGGGCT AGGGAGTTGG TTAATGGTAA GGCTGATGTG GTTGCTTATT CAGGTTATAA ATTACCCATA GAGGGTGACG TGATTTGGGG TTCCGATGAG TTAATTAAAG TAATAGCCTC ATGGATTAAA CCAGGTTCAA GCATTCTAAT TGATGATTCA AGTAGACAAT TCATTAGGAA GGCCCTTGAT ACCGTTAACG CTAAGCCTAT TGACGCCTCA GCGGATATTC TTGAGGCTAG GGCTGTTAAA ACCCCTGAGG AGGTTGAGTT AATTAAGGGT GCAATTAATA TAACCCTCAA AGTGTTAAAG GAATTATACG GCATGAGGAT TACTGGAATG AGTGAGAGGG ATTTAGCGGC ATACATTTAC CATGGGTTAA TAAGCTATGG TGGGGATGAG GCTGCCTTTA ATCCAATAGT TGGCTCAGGG CCGAATGCAG CTAAACCCCA CCATACGCAT AGTGATAGGC GTATAGGTGT TAATGAAACC GTGGTAATTG ATATTGGTGC ACGGTATAGG CTGTATTGCT CAGACTTAAC TAGAACATTA GTAACTGGGT CACTTGAGGG TAAGCTTAAG GACGCCTACA ATGCGGTTAT TGAGGCTTCA AGAAGAGCAA TAAGCATTAT TAAACCGGGA GTTAAGGCAA GTGATGTTGA TGCAGCGGCT AGGGGAGTGA TTAGTGAGTA TGGTTTCGCC TGGGGTTTCA TACATAGCCT TGGCCATGGG GTGGGTGTTG AGGTTCATGA AAGGCCAGCA ATTGGACCTA GCAGCAATGA CGTATTGAGG GAGGGTAATG TGATTACCAT TGAGCCAGGC ATATACATTA AGGATGTGGG TGGGATTAGG GTTGAGAACA TGGTTCTCGT TACTGAGAAC GGTGCGGAGG TTTTAACTAG GGATGAGTAC GCTTACGTTT AA
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Protein sequence | MIGDKLSRVR SLIKDKGATA LILTNPSNMG YLLGYEDGLL AYIDDSVIKV IAPLLDRERA RELVNGKADV VAYSGYKLPI EGDVIWGSDE LIKVIASWIK PGSSILIDDS SRQFIRKALD TVNAKPIDAS ADILEARAVK TPEEVELIKG AINITLKVLK ELYGMRITGM SERDLAAYIY HGLISYGGDE AAFNPIVGSG PNAAKPHHTH SDRRIGVNET VVIDIGARYR LYCSDLTRTL VTGSLEGKLK DAYNAVIEAS RRAISIIKPG VKASDVDAAA RGVISEYGFA WGFIHSLGHG VGVEVHERPA IGPSSNDVLR EGNVITIEPG IYIKDVGGIR VENMVLVTEN GAEVLTRDEY AYV
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