Gene Cmaq_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1652 
Symbol 
ID5709845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1727015 
End bp1728106 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content44% 
IMG OID641276160 
Productpeptidase M24 
Protein accessionYP_001541465 
Protein GI159042213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.329498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00124152 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGGGG ATAAGTTAAG TAGAGTAAGG TCCCTTATTA AGGATAAGGG GGCTACGGCA 
TTGATTCTAA CTAACCCAAG CAACATGGGT TACCTACTAG GTTATGAGGA TGGGTTACTG
GCTTATATTG ATGACTCGGT AATTAAGGTT ATTGCACCAT TACTGGATCG GGAGAGGGCT
AGGGAGTTGG TTAATGGTAA GGCTGATGTG GTTGCTTATT CAGGTTATAA ATTACCCATA
GAGGGTGACG TGATTTGGGG TTCCGATGAG TTAATTAAAG TAATAGCCTC ATGGATTAAA
CCAGGTTCAA GCATTCTAAT TGATGATTCA AGTAGACAAT TCATTAGGAA GGCCCTTGAT
ACCGTTAACG CTAAGCCTAT TGACGCCTCA GCGGATATTC TTGAGGCTAG GGCTGTTAAA
ACCCCTGAGG AGGTTGAGTT AATTAAGGGT GCAATTAATA TAACCCTCAA AGTGTTAAAG
GAATTATACG GCATGAGGAT TACTGGAATG AGTGAGAGGG ATTTAGCGGC ATACATTTAC
CATGGGTTAA TAAGCTATGG TGGGGATGAG GCTGCCTTTA ATCCAATAGT TGGCTCAGGG
CCGAATGCAG CTAAACCCCA CCATACGCAT AGTGATAGGC GTATAGGTGT TAATGAAACC
GTGGTAATTG ATATTGGTGC ACGGTATAGG CTGTATTGCT CAGACTTAAC TAGAACATTA
GTAACTGGGT CACTTGAGGG TAAGCTTAAG GACGCCTACA ATGCGGTTAT TGAGGCTTCA
AGAAGAGCAA TAAGCATTAT TAAACCGGGA GTTAAGGCAA GTGATGTTGA TGCAGCGGCT
AGGGGAGTGA TTAGTGAGTA TGGTTTCGCC TGGGGTTTCA TACATAGCCT TGGCCATGGG
GTGGGTGTTG AGGTTCATGA AAGGCCAGCA ATTGGACCTA GCAGCAATGA CGTATTGAGG
GAGGGTAATG TGATTACCAT TGAGCCAGGC ATATACATTA AGGATGTGGG TGGGATTAGG
GTTGAGAACA TGGTTCTCGT TACTGAGAAC GGTGCGGAGG TTTTAACTAG GGATGAGTAC
GCTTACGTTT AA
 
Protein sequence
MIGDKLSRVR SLIKDKGATA LILTNPSNMG YLLGYEDGLL AYIDDSVIKV IAPLLDRERA 
RELVNGKADV VAYSGYKLPI EGDVIWGSDE LIKVIASWIK PGSSILIDDS SRQFIRKALD
TVNAKPIDAS ADILEARAVK TPEEVELIKG AINITLKVLK ELYGMRITGM SERDLAAYIY
HGLISYGGDE AAFNPIVGSG PNAAKPHHTH SDRRIGVNET VVIDIGARYR LYCSDLTRTL
VTGSLEGKLK DAYNAVIEAS RRAISIIKPG VKASDVDAAA RGVISEYGFA WGFIHSLGHG
VGVEVHERPA IGPSSNDVLR EGNVITIEPG IYIKDVGGIR VENMVLVTEN GAEVLTRDEY
AYV